FFCP PHASE1:Hg19::chr16:3054211..3054223,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:3054211..3054223,+ | |||
|description=CAGE_peak_at_chr16:3054211..3054223,+ | |description=CAGE_peak_at_chr16:3054211..3054223,+ | ||
|id=chr16:3054211..3054223,+ | |id=chr16:3054211..3054223,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.80e-12!254 | |ontology_enrichment_celltype=CL:0000066!6.80e-12!254 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.62e-12;2!CL:0000242;1.62e-12;2!CL:0000775;1.57e-08;3!CL:0000313;3.26e-07;1!CL:0000094;7.48e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.31e-12,2;CL:0000775,1.23e-08,3;CL:0000313,3.57e-07,1;CL:0000094,6.57e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.80e-08;3!UBERON:0006242;3.26e-07;1!UBERON:0008801;8.00e-07;1!UBERON:0008425;8.00e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.30e-19!106;DOID:0050687!2.29e-15!143;DOID:162!4.36e-12!235;DOID:14566!4.87e-12!239;DOID:7!1.27e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.09e-23;4!DOID:1612;1.09e-23;4!DOID:299;1.15e-13;25!DOID:2152;3.26e-07;1!DOID:3371;8.00e-07;1!DOID:4549;8.00e-07;1!DOID:5861;8.00e-07;1!DOID:6496;8.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.24e-23,4;DOID:1612,1.24e-23,4;DOID:299,1.32e-13,25;DOID:2152,3.57e-07,1;DOID:3371,4.51e-07,1;DOID:4549,4.51e-07,1;DOID:5861,4.51e-07,1;DOID:6496,4.51e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.79e-07!57;UBERON:0005068!1.79e-07!57;UBERON:0006241!1.79e-07!57;UBERON:0007135!1.79e-07!57;UBERON:0007023!3.18e-07!115;UBERON:0003075!8.56e-07!86;UBERON:0007284!8.56e-07!86 | |ontology_enrichment_uberon=UBERON:0001049!1.79e-07!57;UBERON:0005068!1.79e-07!57;UBERON:0006241!1.79e-07!57;UBERON:0007135!1.79e-07!57;UBERON:0007023!3.18e-07!115;UBERON:0003075!8.56e-07!86;UBERON:0007284!8.56e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.50e-09;10!UBERON:0001443;1.09e-08;11!UBERON:0004911;3.26e-07;1!UBERON:0001831;8.00e-07;1!UBERON:0001567;8.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.57e-09,10;UBERON:0001443,1.14e-08,11;UBERON:0004911,3.57e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0.6024118375565,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.649094787309367,0,0.398873881556595,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.614942192715568,0.343135620597051,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,6.3216351836742,4.29243081047436,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0.383382679165211,0,0.44024217006613,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,1.49801404789436,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0.276242966807689,0,0,0,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0.254876273045038,1.66215201785745,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.54941678891006,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,1.01489521846434,0,1.70894156152249,0.476463550915578,0,0.648473311192717,0,0.79312517629427,0.534120355637366,0,0,0,0,0,0,1.39705560002972,0,1.05836791361941,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0.33307196799782,0,0.935702702041099,0.146508179271894,2.91265252198832,0.222886768554957,0.852408440419239,0.23874448473769,0.593929361665277,0,0.994147647766298,0.422008249231538,0.222617410045812,0,0,0,0,0.251932747854276,0.409074730008619,0,0,0.718946809178615,0.179021174675609,0,0,0,0,0.969332746095218,0,0,2.3438498497671,1.22443999994674,0,0.341380344856499,0.508507300585533,0.945550727071745,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,1.99042667876204,1.18219047581419,0.219385397153973,0,0.278847488557207,0,0.227884111694002,1.61394733071642,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0.588187602953219,0.335643173951685,0,0.317873157960757,0,1.14262965711403,0.141353071433941,0,0,0.796118080530053,0,0.296521128680622,0.247127877893006,0.104421949505455,0.337005664903385,0,0.468528891450678,0,0.391329237864179,0,0,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.554698692052555,0.520679215005393,0.195984794828755,0.174118413160805,0,0,0,0.438535902517113,0.0821154570532092,0,1.76512253383001,0.225980740780532,0,0.397429223405979,0,0.782205530939212,0.480952921509202,2.13452994739353,0,0,0.458146384663663,0.343189995723929,0.288109595976299,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.916641696046735,0,0.399358000997982,0,0,0.134366944973453,0,0,0.630265458457789,0.494495150286999,0.539228350833479,0.295282444544246,0,0,0.408610218334727,0,0.137539436597234,0,0,0,0.303747783290123,0,0.157611414598396,0.209818352539992,0,0,0.575745591958336,0,0,1.27134268827375,0,0,0,1.19730191562487,0.082092520749339,0,0.113312091520126,0,3.97520666736664,0.387848869084652,0.13223260174269,0.171086837884329,2.11444506695002,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0.306345576763462,0.327872630709804,0.314108192500469,0,0,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0,0,0,4.21501415226193,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,1.04397716786085,0,0.463044948647668,0.489473409012935,0.358177682162975,0,0.657852148736121,0,0.192914038270915,0.168942440653073,0.76872455576384,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0.567515953566836,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0.196295437002051,0,0.183428598521679,0.462102664601353,0,0,0,0,0.80682027481408,0.781514011233092,0.523813388962845,0,0.739280431085226,0.0675375846183947,0,0,0.19024743058172,0,1.09651553371436,0,0,0.127762427639595,0,0,0.606965604236632,0.455324382702595,0,0,0.171488009437418,0.0679697329768317,0.197318320688547,0.118193840883968,0.222462803784138,0,0,0.840816489941367,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0.170426809518315,0,1.3746412112643,0,0,2.12525320415805,0,0.121917924982269,0,0.205325613712494,1.1598144313382,0,0.467878926924211,0.198950775161368,0,0,0,0.150962843566674,0.617393264863557,1.74847648403166,0.940634592723046,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0.352894871715692,0.641930933513346,0.730336388246517,0,0.143339583151451,0,0.475940431336403,0,0,0,0,0,0.252332849670158,0.109265571963696,0.126698501011437,0.509944148709909,0.26721740526556,0.0918948995348449,0,0,0,0.829169439458779,0.103432995861895,0.426467963801962,0.476128862927481,0,0.0620747142958579,1.90624166387043,0.12729431655633,0.606351566874658,0,0,0,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0.6024118375565,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0.579606171470105,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.649094787309367,0,0.398873881556595,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.614942192715568,0.343135620597051,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,6.3216351836742,4.29243081047436,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0.383382679165211,0,0.44024217006613,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0,0,1.49801404789436,2.99161459204025,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0.276242966807689,0,0,0,0.902399225814824,0.231046011313244,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0.254876273045038,1.66215201785745,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,0.103041011647722,0.54941678891006,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0.229723400206959,1.01489521846434,0,1.70894156152249,0.476463550915578,0,0.648473311192717,0,0.79312517629427,0.534120355637366,0,0,0,0,0,0,1.39705560002972,0,1.05836791361941,0,0,0,0.156679895773023,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0.33307196799782,0,0.935702702041099,0.146508179271894,2.91265252198832,0.222886768554957,0.852408440419239,0.23874448473769,0.593929361665277,0,0.994147647766298,0.422008249231538,0.222617410045812,0,0,0,0,0.251932747854276,0.409074730008619,0,0,0.718946809178615,0.179021174675609,0,0,0,0,0.969332746095218,0,0,2.3438498497671,1.22443999994674,0,0.341380344856499,0.508507300585533,0.945550727071745,0,0,0.173624994933292,0.885741385813839,0.120596438625408,0,1.99042667876204,1.18219047581419,0.219385397153973,0,0.278847488557207,0,0.227884111694002,1.61394733071642,0.0897576444097721,0,0,0,0,0,0.156980256395025,0,0,0.588187602953219,0.335643173951685,0,0.317873157960757,0,1.14262965711403,0.141353071433941,0,0,0.796118080530053,0,0.296521128680622,0.247127877893006,0.104421949505455,0.337005664903385,0,0.468528891450678,0,0.391329237864179,0,0,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0.554698692052555,0.520679215005393,0.195984794828755,0.174118413160805,0,0,0,0.438535902517113,0.0821154570532092,0,1.76512253383001,0.225980740780532,0,0.397429223405979,0,0.782205530939212,0.480952921509202,2.13452994739353,0,0,0.458146384663663,0.343189995723929,0.288109595976299,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.916641696046735,0,0.399358000997982,0,0,0.134366944973453,0,0,0.630265458457789,0.494495150286999,0.539228350833479,0.295282444544246,0,0,0.408610218334727,0,0.137539436597234,0,0,0,0.303747783290123,0,0.157611414598396,0.209818352539992,0,0,0.575745591958336,0,0,1.27134268827375,0,0,0,1.19730191562487,0.082092520749339,0,0.113312091520126,0,3.97520666736664,0.387848869084652,0.13223260174269,0.171086837884329,2.11444506695002,0,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0.306345576763462,0.327872630709804,0.314108192500469,0,0,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0,0,0,4.21501415226193,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,1.04397716786085,0,0.463044948647668,0.489473409012935,0.358177682162975,0,0.657852148736121,0,0.192914038270915,0.168942440653073,0.76872455576384,0,0,0.414775308455192,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0.567515953566836,0,0.139879507719444,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0.196295437002051,0,0.183428598521679,0.462102664601353,0,0,0,0,0.80682027481408,0.781514011233092,0.523813388962845,0,0.739280431085226,0.0675375846183947,0,0,0.19024743058172,0,1.09651553371436,0,0,0.127762427639595,0,0,0.606965604236632,0.455324382702595,0,0,0.171488009437418,0.0679697329768317,0.197318320688547,0.118193840883968,0.222462803784138,0,0,0.840816489941367,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0.430227358820278,0.118332000730565,0.170426809518315,0,1.3746412112643,0,0,2.12525320415805,0,0.121917924982269,0,0.205325613712494,1.1598144313382,0,0.467878926924211,0.198950775161368,0,0,0,0.150962843566674,0.617393264863557,1.74847648403166,0.940634592723046,0,0,0.196308467114945,0.594092800654172,0.4226557275834,0,0,0,0,0,0.352894871715692,0.641930933513346,0.730336388246517,0,0.143339583151451,0,0.475940431336403,0,0,0,0,0,0.252332849670158,0.109265571963696,0.126698501011437,0.509944148709909,0.26721740526556,0.0918948995348449,0,0,0,0.829169439458779,0.103432995861895,0.426467963801962,0.476128862927481,0,0.0620747142958579,1.90624166387043,0.12729431655633,0.606351566874658,0,0,0,0,0,0.162806537221949,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr16:3054211..3054223,+ | |short_description=p@chr16:3054211..3054223,+ | ||
}} | }} |
Latest revision as of 08:11, 25 July 2015
Short description: | p@chr16:3054211..3054223, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:3054211..3054223, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.31e-12 | 2 |
neutrophil | 1.23e-08 | 3 |
serous secreting cell | 3.57e-07 | 1 |
granulocyte | 6.57e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
breast | 1.57e-09 | 10 |
chest | 1.14e-08 | 11 |
epithelium of female gonad | 3.57e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.24e-23 | 4 |
breast cancer | 1.24e-23 | 4 |
adenocarcinoma | 1.32e-13 | 25 |
ovary epithelial cancer | 3.57e-07 | 1 |
chondrosarcoma | 4.51e-07 | 1 |
extraosseous chondrosarcoma | 4.51e-07 | 1 |
myxoid chondrosarcoma | 4.51e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 4.51e-07 | 1 |