FFCP PHASE1:Hg19::chr16:72047835..72047846,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:72047835..72047846,- | |||
|coexpression_cluster_id=C3099 | |||
|description=CAGE_peak_at_chr16:72047835..72047846,- | |description=CAGE_peak_at_chr16:72047835..72047846,- | ||
|id=chr16:72047835..72047846,- | |id=chr16:72047835..72047846,- | ||
|ontology_enrichment_celltype=CL:0000764!3.94e-11!2;CL:0000765!3.94e-11!2;CL:0000050!3.94e-11!2;CL:0000038!3.94e-11!2;CL:0000558!3.94e-11!2;CL:0000547!3.94e-11!2;CL:0000549!3.94e-11!2;CL:0000550!3.94e-11!2;CL:0000552!3.94e-11!2 | |ontology_enrichment_celltype=CL:0000764!3.94e-11!2;CL:0000765!3.94e-11!2;CL:0000050!3.94e-11!2;CL:0000038!3.94e-11!2;CL:0000558!3.94e-11!2;CL:0000547!3.94e-11!2;CL:0000549!3.94e-11!2;CL:0000550!3.94e-11!2;CL:0000552!3.94e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;8.82e-51;2!CL:0000558;8.82e-51;2!CL:0000182;2.90e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.82e-51,2;CL:0000765,8.82e-51,2;CL:0000050,8.82e-51,2;CL:0000038,8.82e-51,2;CL:0000558,8.82e-51,2;CL:0000547,8.82e-51,2;CL:0000549,8.82e-51,2;CL:0000550,8.82e-51,2;CL:0000552,8.82e-51,2;CL:0000182,2.73e-19,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-15!115;UBERON:0000007!6.41e-11!2;UBERON:0002368!1.01e-09!35;UBERON:0005057!3.47e-08!26;UBERON:0006947!2.52e-07!3;UBERON:0004054!2.52e-07!3;UBERON:0002417!2.80e-07!61;UBERON:0000916!2.80e-07!61;UBERON:0000949!3.33e-07!45;UBERON:0002106!4.82e-07!3;UBERON:0004854!4.82e-07!3;UBERON:0009034!4.82e-07!3;UBERON:0002095!4.82e-07!3;UBERON:0004782!4.82e-07!3;UBERON:0003281!4.82e-07!3;UBERON:0009664!4.82e-07!3;UBERON:0002296!4.82e-07!3;UBERON:0005602!4.82e-07!3;UBERON:0001179!4.82e-07!3;UBERON:0006293!4.82e-07!3;UBERON:0005172!7.65e-07!55;UBERON:0005173!7.65e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;8.50e-50;2!UBERON:0003296;1.62e-25;4!UBERON:0010133;1.62e-25;4!UBERON:0002368;9.21e-24;33!UBERON:0002107;3.35e-21;19!UBERON:0006925;3.35e-21;19!UBERON:0002423;3.03e-16;25!UBERON:0000949;1.05e-15;43!UBERON:0001894;4.69e-15;7!UBERON:0002365;1.27e-13;31!UBERON:0002330;1.27e-13;31!UBERON:0002530;6.54e-09;57!UBERON:0005172;6.45e-07;52!UBERON:0005173;6.45e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.09e-49,2;UBERON:0003296,1.84e-25,4;UBERON:0010133,1.84e-25,4;UBERON:0002368,2.10e-25,35;UBERON:0002107,3.18e-21,19;UBERON:0006925,3.18e-21,19;UBERON:0008836,3.18e-21,19;UBERON:0000949,8.15e-20,45;UBERON:0008835,2.09e-18,22;UBERON:0003894,2.09e-18,22;UBERON:0009854,1.25e-17,23;UBERON:0007499,2.91e-16,25;UBERON:0009497,2.91e-16,25;UBERON:0000015,2.91e-16,25;UBERON:0002423,2.91e-16,25;UBERON:0006235,2.91e-16,25;UBERON:0004161,2.91e-16,25;UBERON:0009856,1.17e-15,26;UBERON:0002530,3.69e-15,59;UBERON:0001894,5.04e-15,7;UBERON:0006222,5.04e-15,7;UBERON:0002365,3.27e-13,31;UBERON:0002330,3.27e-13,31;UBERON:0003929,9.26e-08,54;UBERON:0005172,9.26e-08,54;UBERON:0005173,9.26e-08,54;UBERON:0002417,5.10e-07,60;UBERON:0000916,5.10e-07,60 | |||
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| ||
|short_description=p@chr16:72047835..72047846,- | |short_description=p@chr16:72047835..72047846,- | ||
}} | }} |
Latest revision as of 12:08, 25 July 2015
Short description: | p@chr16:72047835..72047846, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:72047835..72047846, - |
Coexpression cluster: | C3099_Reticulocytes_Hepatocyte_choriocarcinoma_liver_pancreatic_Whole_blood |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.82e-51 | 2 |
erythroblast | 8.82e-51 | 2 |
megakaryocyte-erythroid progenitor cell | 8.82e-51 | 2 |
erythroid progenitor cell | 8.82e-51 | 2 |
reticulocyte | 8.82e-51 | 2 |
proerythroblast | 8.82e-51 | 2 |
basophilic erythroblast | 8.82e-51 | 2 |
polychromatophilic erythroblast | 8.82e-51 | 2 |
orthochromatic erythroblast | 8.82e-51 | 2 |
hepatocyte | 2.73e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.09e-49 | 2 |
gland of diencephalon | 1.84e-25 | 4 |
neuroendocrine gland | 1.84e-25 | 4 |
endocrine gland | 2.10e-25 | 35 |
liver | 3.18e-21 | 19 |
digestive gland | 3.18e-21 | 19 |
liver bud | 3.18e-21 | 19 |
endocrine system | 8.15e-20 | 45 |
hepatic diverticulum | 2.09e-18 | 22 |
liver primordium | 2.09e-18 | 22 |
digestive tract diverticulum | 1.25e-17 | 23 |
epithelial sac | 2.91e-16 | 25 |
epithelium of foregut-midgut junction | 2.91e-16 | 25 |
anatomical boundary | 2.91e-16 | 25 |
hepatobiliary system | 2.91e-16 | 25 |
foregut-midgut junction | 2.91e-16 | 25 |
septum transversum | 2.91e-16 | 25 |
sac | 1.17e-15 | 26 |
gland | 3.69e-15 | 59 |
diencephalon | 5.04e-15 | 7 |
future diencephalon | 5.04e-15 | 7 |
exocrine gland | 3.27e-13 | 31 |
exocrine system | 3.27e-13 | 31 |
gut epithelium | 9.26e-08 | 54 |
abdomen element | 9.26e-08 | 54 |
abdominal segment element | 9.26e-08 | 54 |
abdominal segment of trunk | 5.10e-07 | 60 |
abdomen | 5.10e-07 | 60 |