FFCP PHASE1:Hg19::chr16:90001321..90001338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:90001321..90001338,+ | |||
|description=CAGE_peak_at_chr16:90001321..90001338,+ | |description=CAGE_peak_at_chr16:90001321..90001338,+ | ||
|id=chr16:90001321..90001338,+ | |id=chr16:90001321..90001338,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.28e-17!180;CL:0002321!6.96e-13!248;CL:0000220!2.22e-12!246;CL:0000222!2.62e-12!119;CL:0000393!3.46e-10!60;CL:0000211!3.46e-10!60;CL:0000183!2.79e-08!59;CL:0000680!1.79e-07!57;CL:0000056!1.79e-07!57;CL:0000355!1.79e-07!57;CL:0000187!5.08e-07!54 | |ontology_enrichment_celltype=CL:0000055!2.28e-17!180;CL:0002321!6.96e-13!248;CL:0000220!2.22e-12!246;CL:0000222!2.62e-12!119;CL:0000393!3.46e-10!60;CL:0000211!3.46e-10!60;CL:0000183!2.79e-08!59;CL:0000680!1.79e-07!57;CL:0000056!1.79e-07!57;CL:0000355!1.79e-07!57;CL:0000187!5.08e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.45e-12;6!CL:0000404;4.45e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.36e-12,6;CL:0000031,4.36e-12,6;CL:0000404,4.36e-12,6;CL:0000393,3.26e-10,61;CL:0000211,3.26e-10,61;CL:0000047,6.21e-09,8;CL:0000222,6.52e-09,121;CL:0002321,7.77e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000031;4.45e-12;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;7.70e-09;3!DOID:127;7.70e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.99e-09,3;DOID:127,6.99e-09,3;DOID:0060072,9.78e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000119!3.96e-14!312;UBERON:0000483!9.00e-14!309;UBERON:0000475!2.07e-09!365;UBERON:0000025!3.44e-09!194;UBERON:0000914!7.74e-09!83;UBERON:0002329!7.74e-09!83;UBERON:0003077!7.74e-09!83;UBERON:0003059!7.74e-09!83;UBERON:0007282!7.74e-09!83;UBERON:0009618!7.74e-09!83;UBERON:0007285!7.74e-09!83;UBERON:0001637!1.29e-08!42;UBERON:0003509!1.29e-08!42;UBERON:0004572!1.29e-08!42;UBERON:0001981!1.58e-08!60;UBERON:0007500!1.58e-08!60;UBERON:0004537!1.58e-08!60;UBERON:0006965!1.58e-08!60;UBERON:0002049!6.40e-08!79;UBERON:0007798!6.40e-08!79;UBERON:0005256!1.05e-07!143;UBERON:0000477!1.66e-07!286;UBERON:0004290!2.44e-07!70;UBERON:0004111!3.24e-07!241;UBERON:0000468!3.26e-07!659;UBERON:0000055!7.99e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,1.83e-08,59;UBERON:0001981,1.83e-08,59;UBERON:0004537,1.83e-08,59;UBERON:0006965,1.83e-08,59;UBERON:0001637,2.37e-07,42;UBERON:0003509,2.37e-07,42;UBERON:0004572,2.37e-07,42;UBERON:0000055,8.00e-07,68 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0.631719873426831,0,0,3.48900583986214,0,0.791300934685361,0.495065411840187,1.98838425436749,1.34465029290355,1.20538905604795,2.92124036154949,0.975865597581014,0.246242116153576,1.83600622119828,0.940364164434263,0.286235987131057,2.05311637609326,2.25976751270645,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.869079113764942,0,0.486634870302636,0.283604451492204,0.886917589850256,0.790513071238134,0.130979075497713,0,0,0,0,0,0,0,0,0,1.72046919021225,0.347140501607594,0.56530794192401,0.838998872419812,1.6507082516404,0.835979866147242,0,0,0,0.402829317109147,0,1.70843440283719,0.367663080345869,3.24056779152704,0.0892997282840798,0,0.112611480483322,3.06633274931766,0,0.732806975721629,0,0,0,0,0.759783069987479,0.132409180813219,0.860509862246441,2.4826786753885,1.68203280042692,0,1.48000529050296,0,0.134710672069688,0.490385709340376,0.151357427644931,0,0,0.936480230490962,0,0.747243402759005,0.352303495931295,0.323745888736263,0.280901613404497,0,0.982674538494144,0,0,0.494533858557114,0,0,0,0.375355559615893,0,0.438977620880838,1.22595118319608,0,0.453728732640084,0.538168907066586,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.292311015483596,0.504867548488229,0.0920498986422993,0.161646056818812,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0.609868530647977,0.265059536642971,0.348581828608555,0.932949495138334,0.504641701751257,0,0,3.21620469096443,0,0,4.33127689001751,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,2.95262181849859,2.80483547606892,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,2.07986957055916,0,0.231860809950154,0.117408694235822,0.144366447761074,0,0.380508304469197,1.58040879591855,1.71697232418975,0,0,0,0,0.335964256397719,0.283550194484773,0.0895585227028483,0,1.15014803749563,0,0.088048434013226,0,0,0.12624243342638,0,0,0,1.71072446022705,0.616964956219941,0,0,0,0.87192013766656,0.22001485746285,0.129271715757778,3.57656445851882,0.845302752556,0,1.04007436911366,0,1.41849132023278,2.66422179016099,0,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.868687840005475,0.821905290201534,0,0.112085143993527,0,0,0,0.254094624222463,0,5.41302168944387,3.01529277601828,14.0346525363696,0,0,0,0,0,0.271265023699736,0,0.713715955188647,0,0,0,0,2.0694614258501,0.664225598535437,1.65932251687533,0.434418072340414,0,0.686286847621712,0,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0,0,0.482561763430822,0,2.00472601943452,1.9531789784444,0.164254312027618,0,2.32420756919918,0.241718899183244,6.21570057940183,0.184161977871793,0.459257792658427,0.546273504020151,1.44236856455367,0,0.385076685522074,0.784349769176855,0,0.211103257785751,0,0.680374821106063,0.863663664408557,0,0.541892875087706,3.51182841698397,0,1.66215201785745,2.68649705666614,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0.366277859273374,0,0,0,0,0,0.924291702687866,1.5350367472613,0.275673144969061,0.107420244868274,1.16013355131383,1.19317278382541,0.0890320356467374,0,0,0,0,2.32422774648643,0,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0.38126038784765,0.511795582622668,0.42793898803392,0,1.56989728039846,0,0.54907405947211,1.17812402345686,0,3.17020642346017,0,0,0.487426979262569,2.11300293513511,0.136499911407986,1.1312434556297,0,0,0,0.876901770507525,0.578775534266688,0.655894752046633,0.202910376962704,1.8589409885985,0.845086807596724,0.286822704408103,0,1.07001315444375,0.709522128141196,1.26664581178598,0.329294892959902,0,1.39973888097993,0,0,0,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36408156524854,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,1.93866549219044,0.371072392647405,7.98455192004777,0,0,0,0,0,0.236387681767936,1.37897349296586,0,0.173624994933292,0,0,0,0,0.591095237907095,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0.468528891450678,1.094728735294,0,0.242780379534093,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0.225980740780532,0.137041924646751,0,0.126621591911757,0,0,0,0.999048047910651,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.247247575143499,0.202210631562555,0,0,0,0.272406812223151,0.643012593860077,2.75078873194468,7.47792608452533,0,0,0.0607495566580247,0,0,0,0,1.07572403599707,0,0,0,0.25426853765475,2.71499800876856,2.5926644736038,2.28611152076586,0,0,0.170388021785422,0,0,0,0.129282956361551,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,1.220262649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| ||
|short_description=p@chr16:90001321..90001338,+ | |short_description=p@chr16:90001321..90001338,+ | ||
}} | }} |
Latest revision as of 13:34, 25 July 2015
Short description: | p@chr16:90001321..90001338, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:90001321..90001338, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.36e-12 | 6 |
neuroblast | 4.36e-12 | 6 |
electrically signaling cell | 4.36e-12 | 6 |
electrically responsive cell | 3.26e-10 | 61 |
electrically active cell | 3.26e-10 | 61 |
neuronal stem cell | 6.21e-09 | 8 |
mesodermal cell | 6.52e-09 | 121 |
embryonic cell | 7.77e-08 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 1.83e-08 | 59 |
blood vessel | 1.83e-08 | 59 |
blood vasculature | 1.83e-08 | 59 |
vascular cord | 1.83e-08 | 59 |
artery | 2.37e-07 | 42 |
arterial blood vessel | 2.37e-07 | 42 |
arterial system | 2.37e-07 | 42 |
vessel | 8.00e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.99e-09 | 3 |
leiomyoma | 6.99e-09 | 3 |
benign neoplasm | 9.78e-07 | 4 |