FFCP PHASE1:Hg19::chr17:19395753..19395759,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:19395753..19395759,+ | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_at_chr17:19395753..19395759,+ | |description=CAGE_peak_at_chr17:19395753..19395759,+ | ||
|id=chr17:19395753..19395759,+ | |id=chr17:19395753..19395759,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.43e-38!7;CL:0000586!1.43e-38!7;CL:0002322!3.16e-30!5;CL:0000148!1.74e-15!10;CL:0000541!1.74e-15!10;CL:0000147!3.02e-11!14;CL:0000710!4.80e-08!20 | |ontology_enrichment_celltype=CL:0000039!1.43e-38!7;CL:0000586!1.43e-38!7;CL:0002322!3.16e-30!5;CL:0000148!1.74e-15!10;CL:0000541!1.74e-15!10;CL:0000147!3.02e-11!14;CL:0000710!4.80e-08!20 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.28e-84;7!CL:0000586;1.28e-84;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.28e-84,7;CL:0000586,1.28e-84,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.10e-59;10!UBERON:0005564;1.10e-59;10 | |||
|ontology_enrichment_disease=DOID:3095!1.47e-12!22;DOID:2994!1.47e-12!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.00e-52!8;UBERON:0003135!8.08e-38!11;UBERON:0000991!6.53e-20!21;UBERON:0009196!6.53e-20!21;UBERON:0009117!6.53e-20!21;UBERON:0005564!6.53e-20!21;UBERON:0004176!5.17e-19!22;UBERON:0003101!5.17e-19!22;UBERON:0000079!5.17e-19!22;UBERON:0001882!8.72e-18!1;UBERON:0005403!8.72e-18!1;UBERON:0002323!3.99e-09!46;UBERON:0003133!9.57e-09!48;UBERON:0004458!1.44e-08!49;UBERON:0005156!4.14e-07!59;UBERON:0000990!4.14e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.11e-74;8!UBERON:0003135;2.16e-54;11!UBERON:0000991;3.84e-29;21!UBERON:0003101;7.08e-28;22!UBERON:0000079;7.08e-28;22!UBERON:0002323;2.28e-13;45!UBERON:0000922;7.03e-12;49!UBERON:0003133;3.82e-10;44!UBERON:0002553;1.20e-09;52!UBERON:0004458;4.44e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.11e-74,8;UBERON:0003135,2.16e-54,11;UBERON:0000991,3.84e-29,21;UBERON:0009196,3.84e-29,21;UBERON:0009117,3.84e-29,21;UBERON:0005564,3.84e-29,21;UBERON:0004176,7.08e-28,22;UBERON:0003101,7.08e-28,22;UBERON:0000079,7.08e-28,22;UBERON:0002323,5.85e-14,46;UBERON:0003133,2.00e-13,48;UBERON:0004458,3.57e-13,49;UBERON:0003886,4.68e-12,54;UBERON:0005156,3.99e-11,59;UBERON:0000990,3.99e-11,59;UBERON:0002553,8.52e-11,61 | |||
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|short_description=p@chr17:19395753..19395759,+ | |short_description=p@chr17:19395753..19395759,+ | ||
}} | }} |
Latest revision as of 14:32, 25 July 2015
Short description: | p@chr17:19395753..19395759, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:19395753..19395759, + |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.28e-84 | 7 |
germ cell | 1.28e-84 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.11e-74 | 8 |
male reproductive organ | 2.16e-54 | 11 |
gonad | 3.84e-29 | 21 |
indifferent external genitalia | 3.84e-29 | 21 |
indifferent gonad | 3.84e-29 | 21 |
gonad primordium | 3.84e-29 | 21 |
external genitalia | 7.08e-28 | 22 |
male organism | 7.08e-28 | 22 |
male reproductive system | 7.08e-28 | 22 |
body cavity | 5.85e-14 | 46 |
reproductive organ | 2.00e-13 | 48 |
body cavity or lining | 3.57e-13 | 49 |
body cavity precursor | 4.68e-12 | 54 |
reproductive structure | 3.99e-11 | 59 |
reproductive system | 3.99e-11 | 59 |
anatomical cavity | 8.52e-11 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |