FFCP PHASE1:Hg19::chr17:21314604..21314620,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:21314604..21314620,+
|short_description=p@chr17:21314604..21314620,+
|description=CAGE_peak_at_chr17:21314604..21314620,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:21314604..21314620,+ | |||
|coexpression_cluster_id=C1594 | |||
|description=CAGE_peak_at_chr17:21314604..21314620,+ | |||
|id=chr17:21314604..21314620,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.67e-10!254;CL:0002150!1.04e-08!3;CL:0000861!1.04e-08!3;CL:0000082!3.34e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:1000415;3.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.48e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.69e-10;29 | |||
|ontology_enrichment_disease=DOID:305!5.86e-22!106;DOID:0050687!8.84e-16!143;DOID:162!1.02e-08!235;DOID:14566!2.55e-08!239;DOID:4556!1.01e-07!3;DOID:1749!1.95e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3112;8.64e-13;1!DOID:154;2.91e-07;2!DOID:4236;2.91e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.09e-12,1;DOID:305,8.74e-08,106;DOID:154,2.74e-07,2;DOID:4236,2.74e-07,2;DOID:0050687,7.58e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000065!6.06e-23!53;UBERON:0001737!8.78e-23!9;UBERON:0000072!6.83e-21!46;UBERON:0001557!5.50e-20!19;UBERON:0004119!2.12e-18!169;UBERON:0000925!2.12e-18!169;UBERON:0006595!2.12e-18!169;UBERON:0008947!1.95e-17!38;UBERON:0003258!1.95e-17!38;UBERON:0000077!3.32e-17!130;UBERON:0001004!2.11e-16!72;UBERON:0001041!2.99e-16!98;UBERON:0001007!1.26e-15!155;UBERON:0001555!1.26e-15!155;UBERON:0007026!1.26e-15!155;UBERON:0004921!7.17e-14!129;UBERON:0004185!7.17e-14!129;UBERON:0002075!7.36e-10!18;UBERON:0000063!2.01e-09!97;UBERON:0001048!5.10e-09!168;UBERON:0000064!1.13e-07!219;UBERON:0000062!1.43e-07!511;UBERON:0004802!3.34e-07!19;UBERON:0000115!3.34e-07!19;UBERON:0000922!8.73e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.39e-21;9!UBERON:0001557;5.39e-21;9!UBERON:0001264;1.46e-19;10!UBERON:0002075;1.35e-16;18!UBERON:0002323;1.84e-07;45!UBERON:0000065;1.85e-07;44!UBERON:0000072;3.89e-07;37!UBERON:0000949;7.82e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.86e-21,9;UBERON:0001264,1.46e-19,10;UBERON:0002075,1.31e-16,18;UBERON:0001557,4.11e-10,19;UBERON:0002323,5.54e-09,46;UBERON:0004458,2.08e-08,49;UBERON:0008947,1.34e-07,38;UBERON:0003258,1.34e-07,38;UBERON:0003886,1.36e-07,54 | |||
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| ||
|short_description=p@chr17:21314604..21314620,+ | |||
}} | }} |
Latest revision as of 14:42, 25 July 2015
Short description: | p@chr17:21314604..21314620, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:21314604..21314620, + |
Coexpression cluster: | C1594_embryonic_cervical_keratoacanthoma_choriocarcinoma_brain_Osteoblast_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.48e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.86e-21 | 9 |
pancreas | 1.46e-19 | 10 |
viscus | 1.31e-16 | 18 |
upper respiratory tract | 4.11e-10 | 19 |
body cavity | 5.54e-09 | 46 |
body cavity or lining | 2.08e-08 | 49 |
respiratory primordium | 1.34e-07 | 38 |
endoderm of foregut | 1.34e-07 | 38 |
body cavity precursor | 1.36e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.09e-12 | 1 |
carcinoma | 8.74e-08 | 106 |
mixed cell type cancer | 2.74e-07 | 2 |
carcinosarcoma | 2.74e-07 | 2 |
cell type cancer | 7.58e-07 | 143 |