FFCP PHASE1:Hg19::chr17:34879320..34879321,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:34879320..34879321,- to FFCP PHASE1:Hg19::chr17:34879320..34879321,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:34879320..34879321,- | |||
|description=CAGE_peak_at_chr17:34879320..34879321,- | |||
|id=chr17:34879320..34879321,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002593;5.74e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,8.60e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.78e-20!239;DOID:162!4.85e-20!235;DOID:0050687!7.52e-16!143;DOID:305!3.08e-11!106;DOID:0050686!9.87e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.22e-14;1!DOID:3149;1.22e-14;1!DOID:3451;5.74e-08;2!DOID:4159;5.74e-08;2!DOID:0060122;5.74e-08;2!DOID:4468;5.74e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.23e-14,1;DOID:3149,1.23e-14,1;DOID:3451,5.74e-08,2;DOID:4159,5.74e-08,2;DOID:0060122,5.74e-08,2;DOID:4468,6.58e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002784;2.94e-14;4!UBERON:0001894;1.53e-08;7!UBERON:0001897;5.74e-08;2!UBERON:0001905;5.74e-08;2!UBERON:0002757;5.74e-08;2!UBERON:0010134;5.74e-08;2!UBERON:0005408;5.74e-08;2!UBERON:0002456;5.74e-08;2!UBERON:0010225;5.74e-08;2!UBERON:0001899;5.74e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002784,4.40e-14,4;UBERON:0001894,1.92e-08,7;UBERON:0006222,1.92e-08,7;UBERON:0001905,5.37e-08,2;UBERON:0002757,5.37e-08,2;UBERON:0010134,5.37e-08,2;UBERON:0005408,5.37e-08,2;UBERON:0001899,5.37e-08,2;UBERON:0002456,8.60e-08,2;UBERON:0001897,9.19e-08,2;UBERON:0010225,9.19e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.376627918784408,0.229240217243854,0.328402357799783,0.550975469195755,0,0.383829398097213,0,0,0,0.369754010166788,0.697204805222715,0.710846162437108,0,0,0,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.393419540227666,0.393010762749165,0.205601498999509,0,0,0,0,0.557052284425868,0,0,0.270803863765016,0.25618263945135,0.650296737799391,0.657751618414705,0.276350017785848,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0.261958150995425,0.364295288292542,0,0,0,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0.732186172644509,0,0.81014194788176,0.446498641420399,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0,0,0,0.336672227908132,0,0,0,0,0.150238058906597,0,1.4351170855109,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0,1.18143432568886,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0.265059536642971,0.464775771478074,0,0,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0.588664395376038,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0.370353780634118,0.977424915930974,0,1.44331342025273,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.264145302039678,0,0.144119953416961,0,0.253991577168676,0.381988425558278,0,0,0.308482478109971,0.300343057843917,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0.448340575974109,0.197030760201927,0.215627574859517,0.256686072559497,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.215714200818617,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0.321707842287215,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.725156697549733,0,0.0920809889358963,0.229628896329213,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0.877039506583738,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0.41254749960294,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0.435050081742686,0.170453254832202,0.0890320356467374,0,0,0.765676274967505,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0.929015875628594,0.28853842595289,0.213425530045242,0.318852545457645,0.199579371432817,0.191505370132367,0.423347165447766,0.324621940274555,0,0.228234679033192,0.156679895773023,0,0,0.802940375518498,0.403599414382095,0,0,0,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0.66614393599564,0,0,0,0.242721043499027,0.222886768554957,0.284136146806413,0.23874448473769,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0.63337622438398,0,0,0.503865495708552,0.20453736500431,0.246169610922139,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.682760689712998,0.254253650292766,0,0.689486746482929,0.874813840149763,0.694499979733169,0,0,0,0,0.295547618953547,0,0.32681539055697,0.975966209950223,0,0.227884111694002,0.46112780877612,0.448788222048861,0.54323685961004,0,0.0915975934018623,0,0,0.470940769185074,0.332423363800313,0.676786981851542,0.784250137270958,0,1.3282761290693,0,1.26598838716816,0,0.424059214301822,0,0,0,0,0.296521128680622,0.494255755786011,0.730953646538188,0.404406797884062,0,0,0.729819156862664,0.19566461893209,0.242780379534093,0,0,0.61214552326098,0.252746318513952,0.300646838828985,0.518440956986236,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0,0.195984794828755,0.870592065804026,0,0.343972064943233,1.35458863804719,0.511625219603299,0.410577285266046,0.193978032976839,0.0882561266915003,0.225980740780532,0.274083849293502,0,0.126621591911757,0.782205530939212,0,0,0,0.144090417154106,0.458146384663663,0.686379991447858,1.4405479798815,0.248505071130865,0,0.407712618220842,0.104602846312333,0.203996435272644,0,0,0.684526894459965,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.236349546921671,0.247247575143499,0.539228350833479,0.393709926058995,0.338693328263138,0,0.272406812223151,0.643012593860077,0.412618309791701,0,0,0.77380195455795,0.1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| ||
|short_description=p@chr17:34879320..34879321,- | |||
}} | }} |
Latest revision as of 15:47, 25 July 2015
Short description: | p@chr17:34879320..34879321, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:34879320..34879321, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of diencephalon | 4.40e-14 | 4 |
diencephalon | 1.92e-08 | 7 |
future diencephalon | 1.92e-08 | 7 |
pineal body | 5.37e-08 | 2 |
regional part of epithalamus | 5.37e-08 | 2 |
secretory circumventricular organ | 5.37e-08 | 2 |
circumventricular organ | 5.37e-08 | 2 |
epithalamus | 5.37e-08 | 2 |
internal thoracic artery | 8.60e-08 | 2 |
dorsal plus ventral thalamus | 9.19e-08 | 2 |
thalamic complex | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.23e-14 | 1 |
keratoacanthoma | 1.23e-14 | 1 |
skin carcinoma | 5.74e-08 | 2 |
skin cancer | 5.74e-08 | 2 |
integumentary system cancer | 5.74e-08 | 2 |
clear cell adenocarcinoma | 6.58e-08 | 2 |