FFCP PHASE1:Hg19::chr17:38632125..38632156,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:38632125..38632156,- | |||
|coexpression_cluster_id=C405 | |coexpression_cluster_id=C405 | ||
|description=CAGE_peak_at_chr17:38632125..38632156,- | |description=CAGE_peak_at_chr17:38632125..38632156,- | ||
|id=chr17:38632125..38632156,- | |id=chr17:38632125..38632156,- | ||
|ontology_enrichment_celltype=CL:0002536;1.49e-40;2!CL:0002252;5.16e-21;1!CL:0000349;4.65e-10;19!CL:0002251;1.57e-09;20!CL:0002577;6.78e-08;3!CL:0002621;6.78e-08;3!CL:0002623;6.78e-08;3 | |ontology_enrichment_celltype=CL:0002076!1.34e-19!43;CL:0000066!4.49e-17!254;CL:0000223!1.25e-14!59;CL:0002251!1.97e-13!21;CL:0002621!5.81e-11!3;CL:0002623!2.80e-10!3;CL:0000349!3.49e-10!3;CL:0002577!3.49e-10!3;CL:0002368!2.77e-08!13;CL:0002536!4.79e-08!2 | ||
| | |ontology_enrichment_celltype_v019=CL:0002536;1.49e-40;2!CL:0002252;5.16e-21;1!CL:0000349;4.65e-10;19!CL:0002251;1.57e-09;20!CL:0002577;6.78e-08;3!CL:0002621;6.78e-08;3!CL:0002623;6.78e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0002536,1.64e-40,2;CL:0002252,2.82e-21,1;CL:0000349,4.44e-10,19;CL:0002251,1.49e-09,20;CL:0002577,5.93e-08,3;CL:0002621,6.34e-08,3;CL:0002623,7.76e-08,3 | ||
|ontology_enrichment_uberon=UBERON:0000305;2.31e-12;7!UBERON:0005631;6.16e-09;10!UBERON:0000158;6.16e-09;10!UBERON:0000478;4.36e-08;24!UBERON:0001043;6.78e-08;3!UBERON:0001949;6.78e-08;3!UBERON:0000486;1.35e-07;12 | |ontology_enrichment_development_v019=UBERON:0009847;6.78e-08;3!UBERON:0003353;6.78e-08;3 | ||
|ontology_enrichment_disease=DOID:1749!1.71e-09!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.61e-21!14;UBERON:0000158!7.61e-21!14;UBERON:0003124!2.49e-15!7;UBERON:0001987!1.48e-12!4;UBERON:0004340!1.48e-12!4;UBERON:0000478!2.83e-11!24;UBERON:0001949!5.81e-11!3;UBERON:0004119!1.17e-10!169;UBERON:0000925!1.17e-10!169;UBERON:0006595!1.17e-10!169;UBERON:0000161!1.87e-10!35;UBERON:0001004!1.91e-08!72;UBERON:0000166!1.92e-08!21;UBERON:0000305!7.25e-08!7;UBERON:0000165!1.30e-07!28;UBERON:0000930!1.30e-07!28;UBERON:0004923!1.81e-07!57;UBERON:0004871!7.12e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.31e-12;7!UBERON:0005631;6.16e-09;10!UBERON:0000158;6.16e-09;10!UBERON:0000478;4.36e-08;24!UBERON:0001043;6.78e-08;3!UBERON:0001949;6.78e-08;3!UBERON:0000486;1.35e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.90e-13,14;UBERON:0000158,1.90e-13,14;UBERON:0000305,2.37e-12,7;UBERON:0004871,6.29e-11,8;UBERON:0000478,4.20e-08,24;UBERON:0001043,5.54e-08,3;UBERON:0009143,5.54e-08,3;UBERON:0001949,6.34e-08,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.27662058195258,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.9995234035073,0,0.703702806881416,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.447792613514241,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,0.893288987462089,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,0,0,3.01353760869861,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0.0967563312890851,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0.586654148204409,0,0,0,0,0,0,0.864328787928898,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,1.00108261702862,0,0,0.280272163313789,0,0,0,0,0,0,0,0,1.03608082081518,0.17071847709395,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:38632125..38632156,- | |short_description=p@chr17:38632125..38632156,- | ||
}} | }} |
Latest revision as of 16:29, 25 July 2015
Short description: | p@chr17:38632125..38632156, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38632125..38632156, - |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 1.64e-40 | 2 |
epithelial cell of esophagus | 2.82e-21 | 1 |
extraembryonic cell | 4.44e-10 | 19 |
epithelial cell of alimentary canal | 1.49e-09 | 20 |
placental epithelial cell | 5.93e-08 | 3 |
gingival epithelial cell | 6.34e-08 | 3 |
acinar cell of salivary gland | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.90e-13 | 14 |
membranous layer | 1.90e-13 | 14 |
amnion | 2.37e-12 | 7 |
somatic layer of lateral plate mesoderm | 6.29e-11 | 8 |
extraembryonic structure | 4.20e-08 | 24 |
esophagus | 5.54e-08 | 3 |
esophageal region | 5.54e-08 | 3 |
gingival epithelium | 6.34e-08 | 3 |