FFCP PHASE1:Hg19::chr17:39675882..39675894,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39675882..39675894,- | |||
|coexpression_cluster_id=C234 | |coexpression_cluster_id=C234 | ||
|description=CAGE_peak_at_chr17:39675882..39675894,- | |description=CAGE_peak_at_chr17:39675882..39675894,- | ||
|id=chr17:39675882..39675894,- | |id=chr17:39675882..39675894,- | ||
|ontology_enrichment_celltype=CL:0000076!5.19e-14!62;CL:0002076!1.49e-11!43;CL:0000240!9.39e-11!6;CL:0000311!9.39e-11!6;CL:0000079!9.39e-11!6;CL:0000237!9.39e-11!6;CL:0000036!9.39e-11!6;CL:0000357!9.39e-11!6;CL:0000114!9.39e-11!6;CL:0000066!3.44e-10!254;CL:0002231!4.31e-10!3;CL:0000223!4.95e-10!59;CL:0002327!5.26e-08!4;CL:0002336!6.68e-08!1;CL:0002261!6.68e-08!1;CL:0002170!6.68e-08!1 | |ontology_enrichment_celltype=CL:0000076!5.19e-14!62;CL:0002076!1.49e-11!43;CL:0000240!9.39e-11!6;CL:0000311!9.39e-11!6;CL:0000079!9.39e-11!6;CL:0000237!9.39e-11!6;CL:0000036!9.39e-11!6;CL:0000357!9.39e-11!6;CL:0000114!9.39e-11!6;CL:0000066!3.44e-10!254;CL:0002231!4.31e-10!3;CL:0000223!4.95e-10!59;CL:0002327!5.26e-08!4;CL:0002336!6.68e-08!1;CL:0002261!6.68e-08!1;CL:0002170!6.68e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002251;2.58e-14;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,2.58e-14,20;CL:0000076,1.74e-10,63;CL:0002076,2.10e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.69e-39!14;DOID:305!8.46e-09!106 | |ontology_enrichment_disease=DOID:1749!1.69e-39!14;DOID:305!8.46e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.85e-43;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,4.85e-43,14;DOID:7,6.83e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0003729!8.69e-23!5;UBERON:0003343!7.47e-17!4;UBERON:0004785!7.47e-17!4;UBERON:0000974!1.77e-11!10;UBERON:0000344!1.35e-09!12;UBERON:0000997!1.05e-08!1;UBERON:0005056!1.05e-08!1;UBERON:0001911!5.26e-08!4;UBERON:0005333!5.26e-08!4;UBERON:0008425!5.26e-08!4;UBERON:0005311!5.26e-08!4;UBERON:0004119!2.99e-07!169;UBERON:0000925!2.99e-07!169;UBERON:0006595!2.99e-07!169 | |ontology_enrichment_uberon=UBERON:0003729!8.69e-23!5;UBERON:0003343!7.47e-17!4;UBERON:0004785!7.47e-17!4;UBERON:0000974!1.77e-11!10;UBERON:0000344!1.35e-09!12;UBERON:0000997!1.05e-08!1;UBERON:0005056!1.05e-08!1;UBERON:0001911!5.26e-08!4;UBERON:0005333!5.26e-08!4;UBERON:0008425!5.26e-08!4;UBERON:0005311!5.26e-08!4;UBERON:0004119!2.99e-07!169;UBERON:0000925!2.99e-07!169;UBERON:0006595!2.99e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;2.39e-66;1!UBERON:0005056;2.39e-66;1!UBERON:0004176;2.39e-66;1!UBERON:0003343;3.35e-66;4!UBERON:0004785;3.35e-66;4!UBERON:0000974;1.22e-44;6!UBERON:0003729;2.40e-21;13!UBERON:0000161;5.27e-15;19!UBERON:0000166;5.27e-15;19!UBERON:0000344;2.58e-14;20!UBERON:0000165;1.47e-10;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.39e-66,1;UBERON:0005056,2.39e-66,1;UBERON:0003343,3.35e-66,4;UBERON:0004785,3.35e-66,4;UBERON:0000974,2.38e-27,10;UBERON:0003729,2.40e-21,13;UBERON:0000344,2.58e-14,20;UBERON:0000166,4.01e-13,22;UBERON:0000165,3.10e-10,29;UBERON:0000930,3.10e-10,29;UBERON:0000161,1.85e-08,36 | |||
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|short_description=p@chr17:39675882..39675894,- | |short_description=p@chr17:39675882..39675894,- | ||
}} | }} |
Latest revision as of 16:42, 25 July 2015
Short description: | p@chr17:39675882..39675894, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39675882..39675894, - |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 2.58e-14 | 20 |
squamous epithelial cell | 1.74e-10 | 63 |
endo-epithelial cell | 2.10e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 2.39e-66 | 1 |
external female genitalia | 2.39e-66 | 1 |
mucosa of oral region | 3.35e-66 | 4 |
respiratory system mucosa | 3.35e-66 | 4 |
neck | 2.38e-27 | 10 |
mouth mucosa | 2.40e-21 | 13 |
mucosa | 2.58e-14 | 20 |
oral opening | 4.01e-13 | 22 |
mouth | 3.10e-10 | 29 |
stomodeum | 3.10e-10 | 29 |
orifice | 1.85e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 4.85e-43 | 14 |
disease of anatomical entity | 6.83e-08 | 39 |