FFCP PHASE1:Hg19::chr17:39929048..39929057,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:39929048..39929057,-
|short_description=p@chr17:39929048..39929057,-
|description=CAGE_peak_at_chr17:39929048..39929057,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:39929048..39929057,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr17:39929048..39929057,- | |||
|id=chr17:39929048..39929057,- | |||
|ontology_enrichment_celltype=CL:0000181!3.88e-33!12;CL:0000417!3.88e-33!12;CL:0000668!3.88e-33!12;CL:0000414!3.88e-33!12;CL:0000412!3.88e-33!12;CL:0000182!3.88e-33!12;CL:0000223!3.92e-14!59;CL:0002563!5.40e-12!4;CL:0002253!6.80e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.60e-17;12!CL:0002253;2.90e-12;2!CL:0002563;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.60e-17,12;CL:0002253,3.24e-12,2;CL:0002563,9.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.41e-09;11!UBERON:0009497;9.51e-08;13!UBERON:0003104;3.03e-07;31 | |||
|ontology_enrichment_disease=DOID:3493!6.07e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.90e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.59e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0009854!7.35e-47!23;UBERON:0009856!2.53e-41!26;UBERON:0008835!8.24e-40!22;UBERON:0003894!8.24e-40!22;UBERON:0002107!9.68e-37!19;UBERON:0006925!9.68e-37!19;UBERON:0008836!9.68e-37!19;UBERON:0007499!6.40e-35!25;UBERON:0009497!6.40e-35!25;UBERON:0000015!6.40e-35!25;UBERON:0002423!6.40e-35!25;UBERON:0006235!6.40e-35!25;UBERON:0004161!6.40e-35!25;UBERON:0003929!7.28e-28!54;UBERON:0005057!1.20e-26!26;UBERON:0002365!3.19e-22!31;UBERON:0002330!3.19e-22!31;UBERON:0002368!1.37e-19!35;UBERON:0005911!8.43e-18!82;UBERON:0005172!2.66e-15!55;UBERON:0005173!2.66e-15!55;UBERON:0000949!4.76e-15!45;UBERON:0004921!1.03e-14!129;UBERON:0004185!1.03e-14!129;UBERON:0002530!3.33e-14!59;UBERON:0002417!1.09e-13!61;UBERON:0000916!1.09e-13!61;UBERON:0001154!2.75e-12!1;UBERON:0001153!2.75e-12!1;UBERON:0004913!3.85e-12!1;UBERON:0003703!3.85e-12!1;UBERON:0001174!3.85e-12!1;UBERON:0004914!3.85e-12!1;UBERON:0001242!5.40e-12!4;UBERON:0001262!5.40e-12!4;UBERON:0004786!5.40e-12!4;UBERON:0004808!5.40e-12!4;UBERON:0001277!5.40e-12!4;UBERON:0001007!6.28e-12!155;UBERON:0001555!6.28e-12!155;UBERON:0007026!6.28e-12!155;UBERON:0004119!8.85e-11!169;UBERON:0000925!8.85e-11!169;UBERON:0006595!8.85e-11!169;UBERON:0000077!1.32e-10!130;UBERON:0000490!6.90e-10!138;UBERON:0004907!8.49e-10!5;UBERON:0003350!8.88e-10!5;UBERON:0000160!1.17e-09!27;UBERON:0001041!4.28e-08!98;UBERON:0005409!1.73e-07!35;UBERON:0005177!2.59e-07!107;UBERON:0009569!7.32e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.40e-29;19!UBERON:0006925;3.40e-29;19!UBERON:0002423;2.85e-22;25!UBERON:0002365;5.64e-18;31!UBERON:0002330;5.64e-18;31!UBERON:0002368;1.47e-15;33!UBERON:0000949;2.49e-11;43!UBERON:0001007;1.49e-08;81!UBERON:0005172;3.22e-08;52!UBERON:0005173;3.22e-08;52!UBERON:0001052;9.10e-07;4!UBERON:0001242;9.10e-07;4!UBERON:0001262;9.10e-07;4!UBERON:0004786;9.10e-07;4!UBERON:0004808;9.10e-07;4!UBERON:0001277;9.10e-07;4 | |||
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|short_description=p@chr17:39929048..39929057,- | |||
}} | }} |
Latest revision as of 16:49, 25 July 2015
Short description: | p@chr17:39929048..39929057, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39929048..39929057, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.60e-17 | 12 |
epithelial cell of large intestine | 3.24e-12 | 2 |
intestinal epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 3.83e-29 | 19 |
digestive gland | 3.83e-29 | 19 |
liver bud | 3.83e-29 | 19 |
hepatic diverticulum | 3.21e-25 | 22 |
liver primordium | 3.21e-25 | 22 |
digestive tract diverticulum | 3.88e-24 | 23 |
epithelial sac | 3.11e-22 | 25 |
epithelium of foregut-midgut junction | 3.11e-22 | 25 |
anatomical boundary | 3.11e-22 | 25 |
hepatobiliary system | 3.11e-22 | 25 |
foregut-midgut junction | 3.11e-22 | 25 |
septum transversum | 3.11e-22 | 25 |
sac | 2.17e-21 | 26 |
exocrine gland | 5.47e-18 | 31 |
exocrine system | 5.47e-18 | 31 |
endocrine gland | 5.81e-16 | 35 |
gut epithelium | 1.06e-14 | 54 |
endocrine system | 1.83e-12 | 45 |
abdomen element | 2.04e-10 | 54 |
abdominal segment element | 2.04e-10 | 54 |
endo-epithelium | 1.11e-09 | 82 |
gland | 1.52e-09 | 59 |
abdominal segment of trunk | 2.18e-09 | 60 |
abdomen | 2.18e-09 | 60 |
rectum | 9.63e-07 | 4 |
intestinal mucosa | 9.63e-07 | 4 |
wall of intestine | 9.63e-07 | 4 |
gastrointestinal system mucosa | 9.63e-07 | 4 |
gastrointestinal system epithelium | 9.63e-07 | 4 |
intestinal epithelium | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.59e-12 | 2 |