FFCP PHASE1:Hg19::chr17:48148257..48148274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:48148257..48148274,- | |||
|description=CAGE_peak_at_chr17:48148257..48148274,- | |description=CAGE_peak_at_chr17:48148257..48148274,- | ||
|id=chr17:48148257..48148274,- | |id=chr17:48148257..48148274,- | ||
|ontology_enrichment_celltype=CL:0000066!1.69e-37!254;CL:0000220!5.95e-13!246;CL:0002321!1.31e-12!248;CL:0002076!2.30e-12!43;CL:0000076!1.76e-10!62;CL:0000223!5.38e-10!59;CL:0000548!7.66e-10!679;CL:0000004!7.66e-10!679;CL:0000255!7.66e-10!679;CL:0000012!1.58e-09!682;CL:0000063!4.67e-08!578;CL:0000077!1.49e-07!19;CL:1000507!3.87e-07!12;CL:1000494!3.87e-07!12;CL:1000497!7.93e-07!18;CL:0002518!7.93e-07!18 | |ontology_enrichment_celltype=CL:0000066!1.69e-37!254;CL:0000220!5.95e-13!246;CL:0002321!1.31e-12!248;CL:0002076!2.30e-12!43;CL:0000076!1.76e-10!62;CL:0000223!5.38e-10!59;CL:0000548!7.66e-10!679;CL:0000004!7.66e-10!679;CL:0000255!7.66e-10!679;CL:0000012!1.58e-09!682;CL:0000063!4.67e-08!578;CL:0000077!1.49e-07!19;CL:1000507!3.87e-07!12;CL:1000494!3.87e-07!12;CL:1000497!7.93e-07!18;CL:0002518!7.93e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000507;6.78e-12;10!CL:1000494;6.78e-12;10!CL:0002327;1.37e-11;4!CL:0000244;2.17e-11;4!CL:0000731;2.17e-11;4!CL:1000449;3.93e-11;15!CL:0000575;4.85e-11;2!CL:1000497;9.55e-10;17!CL:0002518;9.55e-10;17!CL:0000307;4.19e-07;3 | |ontology_enrichment_celltype_v019=CL:1000507;6.78e-12;10!CL:1000494;6.78e-12;10!CL:0002327;1.37e-11;4!CL:0000244;2.17e-11;4!CL:0000731;2.17e-11;4!CL:1000449;3.93e-11;15!CL:0000575;4.85e-11;2!CL:1000497;9.55e-10;17!CL:0002518;9.55e-10;17!CL:0000307;4.19e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.07e-12,253;CL:1000507,3.37e-12,10;CL:1000494,3.37e-12,10;CL:0000244,8.17e-12,4;CL:0000731,8.17e-12,4;CL:0002327,1.93e-11,4;CL:1000449,2.27e-11,15;CL:0000575,5.13e-11,2;CL:1000497,5.91e-10,17;CL:0002518,5.91e-10,17;CL:0000068,5.55e-07,3;CL:0000069,5.55e-07,3;CL:0000307,5.55e-07,3;CL:0000377,5.55e-07,3;CL:0002681,9.66e-07,12;CL:0002584,9.66e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000377;4.19e-07;3 | |ontology_enrichment_development_v019=CL:0000377;4.19e-07;3 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!3.87e-07!12;UBERON:0001231!3.87e-07!12;UBERON:0004810!3.87e-07!12 | |ontology_enrichment_uberon=UBERON:0009773!3.87e-07!12;UBERON:0001231!3.87e-07!12;UBERON:0004810!3.87e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;6.78e-12;10!UBERON:0009773;6.78e-12;10!UBERON:0001231;6.78e-12;10!UBERON:0004810;6.78e-12;10!UBERON:0001911;1.37e-11;4!UBERON:0006554;1.77e-11;30!UBERON:0001008;1.77e-11;30!UBERON:0006555;3.93e-11;15!UBERON:0004819;3.93e-11;15!UBERON:0001285;3.93e-11;15!UBERON:0007684;3.93e-11;15!UBERON:0000365;3.35e-09;5!UBERON:0000353;8.33e-08;15!UBERON:0005910;9.75e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0004211;6.78e-12;10!UBERON:0009773;6.78e-12;10!UBERON:0001231;6.78e-12;10!UBERON:0004810;6.78e-12;10!UBERON:0001911;1.37e-11;4!UBERON:0006554;1.77e-11;30!UBERON:0001008;1.77e-11;30!UBERON:0006555;3.93e-11;15!UBERON:0004819;3.93e-11;15!UBERON:0001285;3.93e-11;15!UBERON:0007684;3.93e-11;15!UBERON:0000365;3.35e-09;5!UBERON:0000353;8.33e-08;15!UBERON:0005910;9.75e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,3.37e-12,10;UBERON:0001911,1.93e-11,4;UBERON:0005333,1.93e-11,4;UBERON:0008425,1.93e-11,4;UBERON:0005311,1.93e-11,4;UBERON:0004211,2.27e-11,15;UBERON:0009773,2.27e-11,15;UBERON:0001231,2.27e-11,15;UBERON:0001285,2.27e-11,15;UBERON:0007684,2.27e-11,15;UBERON:0004208,2.27e-11,15;UBERON:0006555,1.28e-10,16;UBERON:0004819,1.28e-10,16;UBERON:0000076,5.56e-10,8;UBERON:0000365,1.55e-09,5;UBERON:0005085,1.11e-08,31;UBERON:0006554,1.50e-08,47;UBERON:0001008,2.48e-08,48;UBERON:0005910,5.16e-08,6;UBERON:0000353,5.65e-08,15;UBERON:0001225,9.66e-07,12;UBERON:0008987,9.66e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.791300934685361,0.247532705920093,0.994192127183747,0,0,0,0,0.123121058076788,1.02000345622126,0,0.286235987131057,0.410623275218653,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0.527008714158756,0,2.18577172975525,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0.760272105718513,0,0,0.81014194788176,0,0,0,0,0,0.183201743930407,0,0,1.3082821564276,0,0,0,0,0,1.68203280042692,0,0.98667019366864,0,0.538842688278752,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.794025282120147,0.358779271377724,0.213557388818567,0,0.900273288253207,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0.302256294682921,0.339121184620975,0.57978255948989,0.272746120590835,0,0,0,0,0,0,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,0.473227200159376,0.337169380156203,0,0.220587945464788,0.435758888184812,0.237270619111097,0.539325232640658,0.588664395376038,0,0,1.40241773803446,0,2.94017422771084,0,0,0,0,0,0.171567810298526,0.98775256867763,1.1240175325762,1.3068766413512,0.740707561268237,0,0,5.77325368101093,0.115930404975077,0.117408694235822,0,0.462985512576611,0,0,0.858486162094873,0,0,0,0,0.671928512795438,0.141775097242386,2.95543124919399,2.03443756959773,1.15014803749563,0,0,0,0,0,0,0,0,0,0.205654985406647,0.600686115687835,0,0,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0,1.41849132023278,0.266422179016099,0,0,0,0.65147236858747,0.355391948742546,0,0.602878754119172,0,0.699810938274399,1.2162378064119,0,0,0.479249710983165,0,0,0.434343920002738,0.821905290201534,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0.500170521059677,1.35632511849868,0.623912584592421,1.24900292158013,0,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0.355123450626254,0,0.519254429183621,0.232420756919918,0,1.20303882181971,0.828728900423067,0,0,0,1.35359883872224,1.92538342761037,1.56869953835371,8.76835347919564,0.633309773357254,0,0.170093705276516,0,3.08454505380579,0.270946437543853,4.01351819083883,0.509752546090077,0,0.671624264166535,0,0,1.02580050046556,0.328014645699706,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0.770243085573222,0,0,0,0,0.170453254832202,0,0.495854746082934,0.960950336825531,0.382838137483752,0.4046311234222,0,0,0,0.616067160352178,0.532306030317022,0,0,0,0.372158369359667,0,0.190630193923825,0.767693373934002,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0,0,0,1.12678241012897,0.430234056612155,0.392996164052485,0.35667105148125,0,0,0,0,0.699869440489966,0.192444225451024,1.34060455107157,1.08890984861323,0,0.86101074534246,1.68471475667626,5.32116184244011,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0.852408440419239,0,0,0.307160702099232,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0.269605053441981,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.843992258112108,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0.971121518136371,0,0,0,0.063186579628488,0,0,0,0.661983911750998,0,1.19472429772959,0.284609546029793,0.277349346026277,0,0,0.34823682632161,0,0.343972064943233,0.19351266257817,0.0730893170861856,0,0,0,0,0.274083849293502,0,0,0,0.160317640503067,0.426905989478705,0.799238438328521,0.144090417154106,0,0,0.14405479798815,0.372757606696298,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0.0788057072991982,0.0524545881349981,0.211200673038813,0,0.383830394638891,0.714695326373367,0,0,0,0.864221491201268,0,0,0,0.340776043570843,0.566560457600628,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0.499921631848426,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0.450772826991655,0.380805212168795,0.406870733204662,0.363697318405119,1.18151612746737,0.464033759878494,0.398095888698616,1.60011105865261,0,0,0,0.385239660814607,0,0.521988583930423,0.906823702049089,0.463044948647668,0.489473409012935,1.25362188757041,0,0.438568099157414,0.176689145945881,1.15748422962549,0.168942440653073,0.256241518587947,0.345430341731199,1.51929978088691,0,0,0,0,0.982829546539238,1.2288645437686,0.211312123358627,0,0,0.172214979660816,0,0,0.839277046316667,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0.06915725246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| ||
|short_description=p@chr17:48148257..48148274,- | |short_description=p@chr17:48148257..48148274,- | ||
}} | }} |
Latest revision as of 18:26, 25 July 2015
Short description: | p@chr17:48148257..48148274, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48148257..48148274, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.07e-12 | 253 |
kidney tubule cell | 3.37e-12 | 10 |
nephron tubule epithelial cell | 3.37e-12 | 10 |
transitional epithelial cell | 8.17e-12 | 4 |
urothelial cell | 8.17e-12 | 4 |
mammary gland epithelial cell | 1.93e-11 | 4 |
epithelial cell of nephron | 2.27e-11 | 15 |
corneal epithelial cell | 5.13e-11 | 2 |
kidney cell | 5.91e-10 | 17 |
kidney epithelial cell | 5.91e-10 | 17 |
duct epithelial cell | 5.55e-07 | 3 |
branched duct epithelial cell | 5.55e-07 | 3 |
tracheal epithelial cell | 5.55e-07 | 3 |
tracheoblast | 5.55e-07 | 3 |
kidney cortical cell | 9.66e-07 | 12 |
renal cortical epithelial cell | 9.66e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 3.37e-12 | 10 |
mammary gland | 1.93e-11 | 4 |
mammary bud | 1.93e-11 | 4 |
mammary ridge | 1.93e-11 | 4 |
mammary placode | 1.93e-11 | 4 |
nephron epithelium | 2.27e-11 | 15 |
renal tubule | 2.27e-11 | 15 |
nephron tubule | 2.27e-11 | 15 |
nephron | 2.27e-11 | 15 |
uriniferous tubule | 2.27e-11 | 15 |
nephrogenic mesenchyme | 2.27e-11 | 15 |
excretory tube | 1.28e-10 | 16 |
kidney epithelium | 1.28e-10 | 16 |
external ectoderm | 5.56e-10 | 8 |
urothelium | 1.55e-09 | 5 |
ectodermal placode | 1.11e-08 | 31 |
urinary system structure | 1.50e-08 | 47 |
renal system | 2.48e-08 | 48 |
transitional epithelium | 5.16e-08 | 6 |
parenchyma | 5.65e-08 | 15 |
cortex of kidney | 9.66e-07 | 12 |
renal parenchyma | 9.66e-07 | 12 |