FFCP PHASE1:Hg19::chr17:48261541..48261567,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:48261541..48261567,- | |||
|coexpression_cluster_id=C3653 | |||
|description=CAGE_peak_at_chr17:48261541..48261567,- | |||
|id=chr17:48261541..48261567,- | |||
|ontology_enrichment_celltype=CL:0000055!3.97e-31!180;CL:0000057!2.25e-20!75;CL:0000183!7.13e-13!59;CL:0000680!1.90e-12!57;CL:0000056!1.90e-12!57;CL:0000355!1.90e-12!57;CL:0000187!2.03e-11!54;CL:0000048!5.61e-11!430;CL:0000723!3.14e-10!436;CL:0000034!2.76e-09!444;CL:0000393!4.22e-09!60;CL:0000211!4.22e-09!60;CL:0002371!3.43e-08!591;CL:0000192!8.80e-08!42;CL:0000514!8.80e-08!42;CL:0002334!1.23e-07!12;CL:0000499!8.53e-07!27;CL:0000144!8.60e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.70e-08;12!CL:0000197;4.75e-07;6!CL:0000098;4.75e-07;6!CL:0002167;4.75e-07;6!CL:0000057;4.95e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.15e-17,76;CL:0000048,1.25e-10,427;CL:0000723,3.73e-10,433;CL:0000034,1.52e-09,441;CL:0002334,3.92e-08,12;CL:0000134,1.92e-07,354;CL:0002320,1.96e-07,361;CL:0000197,4.01e-07,6;CL:0000098,4.01e-07,6;CL:0002167,4.01e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.91e-14!83;UBERON:0002329!8.91e-14!83;UBERON:0003077!8.91e-14!83;UBERON:0003059!8.91e-14!83;UBERON:0007282!8.91e-14!83;UBERON:0009618!8.91e-14!83;UBERON:0007285!8.91e-14!83;UBERON:0004290!4.36e-13!70;UBERON:0001134!7.01e-13!61;UBERON:0002036!7.01e-13!61;UBERON:0003082!7.01e-13!61;UBERON:0002385!4.96e-12!63;UBERON:0001015!4.96e-12!63;UBERON:0000383!4.96e-12!63;UBERON:0000486!5.74e-12!82;UBERON:0005256!1.27e-09!143;UBERON:0002100!3.18e-07!216;UBERON:0000475!5.95e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.19e-10;6!UBERON:0002358;2.19e-10;6!UBERON:0003684;2.19e-10;6!UBERON:0001178;2.19e-10;6!UBERON:0004457;1.59e-08;9!UBERON:0000042;1.59e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.25e-10,6;UBERON:0002358,3.25e-10,6;UBERON:0003684,3.25e-10,6;UBERON:0001178,3.25e-10,6;UBERON:0002384,1.11e-07,371;UBERON:0002199,8.03e-07,46;UBERON:0002416,8.03e-07,46 | |||
|phase1_expression=4.1786027232228,1.2846031433459,14.518303621885,2.00146596706261,1.34088328328186,0,2.53299878168311,0,0,0,0,1.74753097704138,1.05506791291381,0.37129905888014,0,1.34465029290355,0,0,0,3.0780264519197,0.204000691244253,0.313454721478088,0.286235987131057,0.547497700291537,0.376627918784408,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.511450247374121,10.843174571537,4.01070328508712,1.44846518960824,2.3858578411533,1.45990461090791,0.378139268656271,1.33037638477538,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,9.44246708221105,2.40597972162702,0.926864265692532,7.17091551872034,0.354668382198357,1.68203280042692,12.8098794875646,1.97334038733728,0,0.269421344139376,0.326923806226917,11.3518070733699,1.72852777344,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0,0,0.61246251376468,0.245668634623536,0.103325781175765,4.75201142912821,0.494533858557114,0,2.87447256726495,0,0.125118519871964,0,0.438977620880838,1.83892677479412,0.300476117813194,1.70148274740032,3.22901344239952,12.813443329114,12.2920502672546,2.40072876867522,0.721367704669072,1.03056216018252,7.07244054060041,4.05063197379039,0.876933046450788,2.01947019395292,15.8325825664755,0.161646056818812,2.4850671476163,0,2.54340888465731,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,1.39310378409594,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0,0,0,0,5.7620361586396,1.47008711385542,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5867062865676,10.9880958394111,0,3.381211010224,1.86156681609409,2.08014873822732,1.54324424557285,0,0,6.29103172095849,41.2392420097497,0,0.65147236858747,1.42156779497018,0.791951872933429,0.602878754119172,0,0.299918973546171,0,0,0,11.2623682081044,1.14861935834114,1.42636905040718,1.44781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.981531933753119,0,0.271265023699736,7.27898015357825,5.70972764150918,4.88877486605197,2.6942525448324,13.8435205874751,0,1.03473071292505,1.99267679560631,0,0.695068915744663,12.1396717626899,0.343143423810856,0,0,0,0.606255142892519,1.66435439510497,0.604780586659361,7.93944985020086,8.74733247741956,4.2099014164961,51.5119380007918,6.14048698880044,9.00781958404202,0,0.154209693802656,1.9531789784444,1.39616165223476,0.519254429183621,0.232420756919918,0,0,0,3.90369123759663,1.0925470080403,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,1.35473218771926,1.00337954770971,0,0,0,0,0,0,0.328014645699706,0,0,0.54941678891006,0.41254749960294,0,0,3.21367859688319,0.48335359146061,0.308097234229289,0.614014698904518,0.137836572484531,1.18162269355101,0.580066775656914,0.0852266274161009,5.51998621009772,0.165284915360978,0,0,0,0.929691098594572,7.24068397710472,0,1.54016790088044,0.532306030317022,0.869932992075073,0.9266210955196,0,0.372158369359667,6.32758849437452,0.953150969619124,2.303080121802,0.42793898803392,1.27281299170375,0,1.07923474549989,0.823611089208164,0.589062011728432,0,1.58510321173008,0,3.41343617362713,0.731140468893853,0,0.9554993798559,2.2624869112594,0,2.75682671773062,0,0,2.89387767133344,0.655894752046633,1.62328301570163,0.30982349809975,0,0.286822704408103,0.982490410131212,0.35667105148125,0,0.211107635297664,1.64647446479951,3.03578539012572,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0,12.1305439188105,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,1.84680620409113,0.113942055847001,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,8.02577647298789,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0.0730893170861856,0.0821154570532092,0,0,5.87549926029384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0.429765441419957,0,0,0,0,0.399358000997982,0,0,1.5452198671947,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472091293214983,0,0,0,0,0,0,0,0,0.326587360109409,0,0,5.79319274070434,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23882204330311,2.33713309847224,0.554805861502613,0.189403005275089,0,0,0,0.756154618816195,0.932623203496683,0.443565449968902,0.159296767163702,0,0.155262956876259,1.65882483136342,1.06336685823198,1.5652351854352,5.55953153289708,1.14241563650639,0.813741466409323,0.909243296012797,1.39633724155235,0,1.59238355479446,0,4.8075398725591,3.03074539889327,1.26184898228651,0,0.643324774124777,0,0,0.694567422971502,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,4.13405655849444,0,0,7.75887076119505,0.918736432059601,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,3.81382095467167,0,1.39241355481392,0.0752103283492573,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.709618961301111,0,0.171488009437418,0,0,0,0,0,0.471346769748006,0,1.82631744101899,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0,0,6.95888658802919,27.1998156113118,0,0,0,0,0,0,0,1.5299169235277,0,0,0,0,0,4.226557275834,0.679708458751268,0,0.386747327841463,0,0,0,0,0,0,0,0.157771562193185,0,0,2.645134202577,15.9957857811703,1.84870251452567,14.276676550085,0,0,0.253397002022874,0,0,0,0,0.378893491091197,0,0,0,0,3.80903090341985,0.129177819672012,0.186224142887574,0,0,1.41482032270754,0.217716747896961,0.342233301085281,0,0.215166616178029,4.32458463509817,0,0,1.9307228228694,0,25.81050366438,0.611207220914332,6.91723503136755,0,0,0 | |||
|short_description=p@chr17:48261541..48261567,- | |||
}} |
Latest revision as of 18:28, 25 July 2015
Short description: | p@chr17:48261541..48261567, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48261541..48261567, - |
Coexpression cluster: | C3653_Preadipocyte_Mesenchymal_Adipocyte_skin_Ewing_Smooth_Chondrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.15e-17 | 76 |
multi fate stem cell | 1.25e-10 | 427 |
somatic stem cell | 3.73e-10 | 433 |
stem cell | 1.52e-09 | 441 |
preadipocyte | 3.92e-08 | 12 |
mesenchymal cell | 1.92e-07 | 354 |
connective tissue cell | 1.96e-07 | 361 |
receptor cell | 4.01e-07 | 6 |
sensory epithelial cell | 4.01e-07 | 6 |
olfactory epithelial cell | 4.01e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.25e-10 | 6 |
peritoneum | 3.25e-10 | 6 |
abdominal cavity | 3.25e-10 | 6 |
visceral peritoneum | 3.25e-10 | 6 |
connective tissue | 1.11e-07 | 371 |
integument | 8.03e-07 | 46 |
integumental system | 8.03e-07 | 46 |