FFCP PHASE1:Hg19::chr17:74134377..74134388,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr17:74134377..74134388,- to FFCP PHASE1:Hg19::chr17:74134377..74134388,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:74134377..74134388,- | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chr17:74134377..74134388,- | |||
|id=chr17:74134377..74134388,- | |||
|ontology_enrichment_celltype=CL:1000507!7.72e-10!12;CL:1000494!7.72e-10!12;CL:1000449!3.32e-07!16;CL:0000047!6.21e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.16e-26;1!CL:0000159;6.43e-14;2!CL:0002535;8.82e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.16e-26,1;CL:0000159,6.43e-14,2;CL:0002535,8.28e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;8.82e-14;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;2.16e-26;1!DOID:120;3.36e-15;27!DOID:193;3.47e-14;29!DOID:4468;7.30e-14;2!DOID:299;1.17e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.16e-26,1;DOID:120,3.30e-15,27;DOID:193,3.41e-14,29;DOID:4468,7.30e-14,2;DOID:299,1.17e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0006947!1.72e-11!3;UBERON:0004054!1.72e-11!3;UBERON:0000080!3.27e-11!18;UBERON:0002120!3.27e-11!18;UBERON:0004875!3.27e-11!18;UBERON:0005721!3.27e-11!18;UBERON:0005754!3.27e-11!18;UBERON:0007297!3.27e-11!18;UBERON:0002113!5.08e-11!27;UBERON:0003918!5.08e-11!27;UBERON:0005095!5.08e-11!27;UBERON:0007687!5.08e-11!27;UBERON:0003133!5.12e-11!48;UBERON:0000489!6.34e-11!32;UBERON:0003135!1.52e-10!11;UBERON:0004175!5.95e-10!25;UBERON:0004876!5.96e-10!20;UBERON:0009773!7.72e-10!12;UBERON:0001231!7.72e-10!12;UBERON:0004810!7.72e-10!12;UBERON:0003887!2.07e-09!21;UBERON:0000058!2.77e-09!26;UBERON:0006555!3.46e-09!17;UBERON:0005103!3.46e-09!17;UBERON:0000083!3.46e-09!17;UBERON:0009201!3.46e-09!17;UBERON:0004819!3.46e-09!17;UBERON:0006553!3.46e-09!17;UBERON:0003074!3.46e-09!17;UBERON:0003060!3.46e-09!17;UBERON:0005172!6.06e-09!55;UBERON:0005173!6.06e-09!55;UBERON:0005904!1.03e-08!4;UBERON:0005156!2.25e-08!59;UBERON:0000990!2.25e-08!59;UBERON:0002417!9.13e-08!61;UBERON:0000916!9.13e-08!61;UBERON:0002553!1.43e-07!70;UBERON:0003886!1.45e-07!63;UBERON:0004211!3.32e-07!16;UBERON:0001285!3.32e-07!16;UBERON:0007684!3.32e-07!16;UBERON:0003220!3.32e-07!16;UBERON:0004208!3.32e-07!16;UBERON:0005743!5.46e-07!86;UBERON:0007023!6.33e-07!115;UBERON:0000073!7.28e-07!94;UBERON:0001016!7.28e-07!94;UBERON:0000466!9.51e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.16e-26;1!UBERON:0001301;4.06e-26;1!UBERON:0004909;6.43e-14;2!UBERON:0006955;8.82e-14;2!UBERON:0004801;8.82e-14;2!UBERON:0003127;1.37e-13;2!UBERON:0004175;2.61e-11;21!UBERON:0006947;1.24e-09;3!UBERON:0004054;1.24e-09;3!UBERON:0001896;1.41e-09;3!UBERON:0005290;1.41e-09;3!UBERON:0003133;1.30e-07;44!UBERON:0005904;1.54e-07;4!UBERON:0000995;8.97e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.16e-26,1;UBERON:0001301,4.61e-26,1;UBERON:0004909,6.43e-14,2;UBERON:0006955,8.28e-14,2;UBERON:0004801,8.28e-14,2;UBERON:0003127,1.55e-13,2;UBERON:0006947,1.30e-09,3;UBERON:0004054,1.30e-09,3;UBERON:0004175,1.31e-09,25;UBERON:0001896,1.41e-09,3;UBERON:0005290,1.41e-09,3;UBERON:0010096,1.41e-09,3;UBERON:0003133,9.96e-09,48;UBERON:0005904,1.59e-07,4;UBERON:0005156,3.62e-07,59;UBERON:0000990,3.62e-07,59;UBERON:0006555,3.78e-07,16;UBERON:0004819,3.78e-07,16 | |||
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| ||
|short_description=p@chr17:74134377..74134388,- | |||
}} | }} |
Latest revision as of 21:20, 25 July 2015
Short description: | p@chr17:74134377..74134388, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:74134377..74134388, - |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.16e-26 | 1 |
seromucus secreting cell | 6.43e-14 | 2 |
epithelial cell of cervix | 8.28e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.16e-26 | 1 |
epididymis | 4.61e-26 | 1 |
epithelium of gonad | 6.43e-14 | 2 |
uterine epithelium | 8.28e-14 | 2 |
cervix epithelium | 8.28e-14 | 2 |
open tracheal system trachea | 1.55e-13 | 2 |
male genital duct | 1.30e-09 | 3 |
internal male genitalia | 1.30e-09 | 3 |
internal genitalia | 1.31e-09 | 25 |
medulla oblongata | 1.41e-09 | 3 |
myelencephalon | 1.41e-09 | 3 |
future myelencephalon | 1.41e-09 | 3 |
reproductive organ | 9.96e-09 | 48 |
duct of male reproductive system | 1.59e-07 | 4 |
reproductive structure | 3.62e-07 | 59 |
reproductive system | 3.62e-07 | 59 |
excretory tube | 3.78e-07 | 16 |
kidney epithelium | 3.78e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.16e-26 | 1 |
female reproductive organ cancer | 3.30e-15 | 27 |
reproductive organ cancer | 3.41e-14 | 29 |
clear cell adenocarcinoma | 7.30e-14 | 2 |
adenocarcinoma | 1.17e-09 | 25 |