FFCP PHASE1:Hg19::chr17:75137705..75137709,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:75137705..75137709,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr17:75137705..75137709,- | |||
|id=chr17:75137705..75137709,- | |||
|ontology_enrichment_celltype=CL:0000094!4.85e-09!8;CL:0000764!4.76e-07!2;CL:0000765!4.76e-07!2;CL:0000050!4.76e-07!2;CL:0000038!4.76e-07!2;CL:0000558!4.76e-07!2;CL:0000547!4.76e-07!2;CL:0000549!4.76e-07!2;CL:0000550!4.76e-07!2;CL:0000552!4.76e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.58e-57;2!CL:0000558;3.58e-57;2!CL:0000771;1.65e-15;2!CL:0000094;4.53e-15;8!CL:0000081;3.05e-11;11!CL:0000775;1.20e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.58e-57,2;CL:0000765,3.58e-57,2;CL:0000050,3.58e-57,2;CL:0000038,3.58e-57,2;CL:0000558,3.58e-57,2;CL:0000547,3.58e-57,2;CL:0000549,3.58e-57,2;CL:0000550,3.58e-57,2;CL:0000552,3.58e-57,2;CL:0000771,1.33e-15,2;CL:0000094,4.07e-15,8;CL:0000081,2.83e-11,11;CL:0000775,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.32e-85;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.78e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;6.03e-43;6!UBERON:0002680;5.91e-29;9!UBERON:0001895;5.91e-29;9!UBERON:0004733;6.10e-22;12!UBERON:0002028;6.10e-22;12!UBERON:0004732;2.55e-20;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,7.48e-43,6;UBERON:0006215,7.48e-43,6;UBERON:0002680,6.82e-29,9;UBERON:0001895,6.82e-29,9;UBERON:0010092,6.82e-29,9;UBERON:0004733,6.79e-22,12;UBERON:0002028,6.79e-22,12;UBERON:0007277,6.79e-22,12;UBERON:0004732,2.82e-20,13;UBERON:0003076,1.10e-17,15;UBERON:0003057,1.10e-17,15 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0.336985893439485,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.25248486685276,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.256686072559497,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,3.28889814968902,3.92153176537351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,3.05163472634166,7.29823115546083,2.06883333267483,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0.0882561266915003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr17:75137705..75137709,- | |||
}} |
Latest revision as of 21:39, 25 July 2015
Short description: | p@chr17:75137705..75137709, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:75137705..75137709, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.58e-57 | 2 |
erythroblast | 3.58e-57 | 2 |
megakaryocyte-erythroid progenitor cell | 3.58e-57 | 2 |
erythroid progenitor cell | 3.58e-57 | 2 |
reticulocyte | 3.58e-57 | 2 |
proerythroblast | 3.58e-57 | 2 |
basophilic erythroblast | 3.58e-57 | 2 |
polychromatophilic erythroblast | 3.58e-57 | 2 |
orthochromatic erythroblast | 3.58e-57 | 2 |
eosinophil | 1.33e-15 | 2 |
granulocyte | 4.07e-15 | 8 |
blood cell | 2.83e-11 | 11 |
neutrophil | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 7.48e-43 | 6 |
rhombic lip | 7.48e-43 | 6 |
regional part of metencephalon | 6.82e-29 | 9 |
metencephalon | 6.82e-29 | 9 |
future metencephalon | 6.82e-29 | 9 |
segmental subdivision of hindbrain | 6.79e-22 | 12 |
hindbrain | 6.79e-22 | 12 |
presumptive hindbrain | 6.79e-22 | 12 |
segmental subdivision of nervous system | 2.82e-20 | 13 |
posterior neural tube | 1.10e-17 | 15 |
chordal neural plate | 1.10e-17 | 15 |