FFCP PHASE1:Hg19::chr17:80050857..80050876,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:80050857..80050876,- | |||
|description=CAGE_peak_at_chr17:80050857..80050876,- | |description=CAGE_peak_at_chr17:80050857..80050876,- | ||
|id=chr17:80050857..80050876,- | |id=chr17:80050857..80050876,- | ||
|ontology_enrichment_celltype=CL:0000066!6.58e-10!254;CL:0000325!5.97e-07!39 | |ontology_enrichment_celltype=CL:0000066!6.58e-10!254;CL:0000325!5.97e-07!39 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.80e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!1.95e-08!219;UBERON:0000119!1.64e-07!312;UBERON:0000483!3.04e-07!309;UBERON:0001737!7.67e-07!9 | |ontology_enrichment_uberon=UBERON:0000064!1.95e-08!219;UBERON:0000119!1.64e-07!312;UBERON:0000483!3.04e-07!309;UBERON:0001737!7.67e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.87e-13;9!UBERON:0001557;7.87e-13;9!UBERON:0000072;1.84e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.68e-13,9;UBERON:0008947,1.56e-08,38;UBERON:0003258,1.56e-08,38;UBERON:0000483,2.88e-07,306;UBERON:0000119,4.61e-07,309;UBERON:0001048,5.24e-07,160;UBERON:0001557,8.02e-07,19;UBERON:0001041,9.39e-07,87 | |||
|phase1_expression=0.54503513781167,8.34992043174834,0.563817616383885,4.00293193412522,0.446961094427288,2.61701557230111,2.53299878168311,0,10.7086107561934,0,4.18680700783456,0,0.263766978228454,0.247532705920093,0.331397375727916,1.34465029290355,2.41077811209591,0,0,0.492484232307152,1.42800483870977,0,0,1.09499540058307,0.753255837568817,1.29902789771517,0.656804715599566,0.708397031823113,0,0,0,1.83884244895785,1.204823675113,1.10926203050036,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0.361439152384566,0,0,0,0,1.03988298880475,1.55210578223795,1.49319135678314,0.196468613246569,0.364295288292542,0.370784442784429,0,0,0.26591592103773,0,0,0,0,0.860234595106124,0,0,0,2.20094433552054,0.835979866147242,0,0.35576626268671,0,1.20848795132744,0,0.488124115096339,0.735326160691737,0.81014194788176,0.535798369704479,0.673588117878509,0,0,0,0.549605231791222,0,0,1.3082821564276,0,0.379891534993739,0,0.860509862246441,0,2.24271040056923,0,0.74000264525148,0,0.808264032418128,1.14423332179421,0.454072282934794,0,0,0.936480230490962,0,0.149448680551801,3.87533845524424,1.29498355494505,1.82586048712923,0.408308342509787,3.19369225010597,0.723280468230358,0,0.989067717114227,0.910161361938026,2.87447256726495,0.168336113954066,3.75355559615892,0.554128230968366,0,0.612975591598039,0.45071417671979,0,0.179389635688862,0,0,0,0.206105058476878,0.772921620136887,0,0.168776332241266,0.0974370051611986,0.252433774244115,0.0920498986422993,0.161646056818812,0.710019185033229,0.201504196455281,0,0.193260853163297,0.272746120590835,0.573609190778008,0.365921118388786,0.530119073285941,0.580969714347592,0.414644220061482,0.504641701751257,0.72995471815166,0,0.643240938192885,0,0.928735856063958,2.16563844500876,1.8929088006375,2.02301628093722,2.16909926895134,2.31617342738027,2.61455332910887,2.60997681022206,1.61797569792197,0.98110732562673,1.15424147083917,1.4763109092493,1.40241773803446,0,1.47008711385542,0,0,0,0,0.860919069801795,0.514703430895577,1.64625428112938,0,2.51322431029077,1.29623823221941,0,4.15973914111831,0,0.231860809950154,0.117408694235822,0.433099343283221,0,0.380508304469197,2.37061319387782,0.858486162094873,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0.179117045405697,0.581267877027924,1.53353071666084,0,0.088048434013226,0,0,0,0.190493682876507,1.14596527667483,0,3.4214489204541,1.13110241973656,0.600686115687835,1.14330573052231,0.336393253036082,0.87192013766656,0.22001485746285,0.258543431515556,0,0,0.26593811658487,0,0.514414748524284,1.41849132023278,0.799266537048298,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0,0.336255431980582,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0,0.500170521059677,0.271265023699736,0,0.892144943985809,0.315404830067869,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.781952530212746,0.979005787313703,0.686286847621712,0,0.431428401637234,0,0.303127571446259,0,0.30239029332968,0,0.460385919864187,0.561320188866147,0.256278298511402,0,0.321707842287215,1.48418066444991,0.462629081407967,0.532685175939381,0.0821271560138091,0.519254429183621,0.348631135379878,0.604297247958111,1.40354529212299,0.184161977871793,0.229628896329213,0,0.524497659837696,0.451199612907412,0.462092022626489,0.784349769176855,0,0.316654886678627,2.27466768141793,1.36074964221213,0.431831832204279,0,0.541892875087706,1.00337954770971,0,1.66215201785745,0.223874754722178,0,0,1.28225062558195,0.656029291399411,0.325378394664303,0.515205058238611,2.38080608527693,0.165018999841176,0,1.95018073810956,0,0.096670718292122,2.00263202249038,2.30255512089194,1.10269257987624,0.751941714077915,2.61030049045611,0.93749290157711,0.0890320356467374,0.495854746082934,0.576570202095319,0.127612712494584,0.2023155617111,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0.372158369359667,0,1.33441135746677,0.767693373934002,0.42793898803392,0,1.56989728039846,0.179872457583315,3.29444435683266,1.29593642580255,0,0,0,1.46290121726877,0,0,0.136499911407986,1.1312434556297,2.26016233240486,0.551365343546124,0.66343897524122,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0.563391205064483,0.430234056612155,0.196498082026242,0,0.354761064070598,0.211107635297664,0,0.75894634753143,1.39973888097993,0.288666338176536,1.34060455107157,2.17781969722645,0.659006605437454,0.43050537267123,3.36942951335251,0.443430153536676,0.918893600827838,0,0,0,0,0,0,0,0,0.747768497892312,0,0.490080431962063,0,0,0,0,0.399158742865633,0,0.635020748171649,0.324621940274555,0.280797178113459,0.228234679033192,1.0967592704111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|short_description=p@chr17:80050857..80050876,- | |short_description=p@chr17:80050857..80050876,- | ||
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Latest revision as of 23:00, 25 July 2015
Short description: | p@chr17:80050857..80050876, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:80050857..80050876, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.80e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.68e-13 | 9 |
respiratory primordium | 1.56e-08 | 38 |
endoderm of foregut | 1.56e-08 | 38 |
epithelium | 2.88e-07 | 306 |
cell layer | 4.61e-07 | 309 |
primordium | 5.24e-07 | 160 |
upper respiratory tract | 8.02e-07 | 19 |
foregut | 9.39e-07 | 87 |