FFCP PHASE1:Hg19::chr18:40215689..40215694,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:40215689..40215694,+ | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_at_chr18:40215689..40215694,+ | |description=CAGE_peak_at_chr18:40215689..40215694,+ | ||
|id=chr18:40215689..40215694,+ | |id=chr18:40215689..40215694,+ | ||
|ontology_enrichment_celltype=CL:0002553!4.53e-14!1;CL:0002535!9.87e-08!2;CL:0002195!2.12e-07!2;CL:0002571!2.12e-07!2 | |ontology_enrichment_celltype=CL:0002553!4.53e-14!1;CL:0002535!9.87e-08!2;CL:0002195!2.12e-07!2;CL:0002571!2.12e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;4.52e-50;2!CL:0000243;3.38e-07;15!CL:0000125;3.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.52e-50,2;CL:0000243,3.38e-07,15;CL:0000125,3.38e-07,15;CL:0000030,3.38e-07,15;CL:0000339,3.38e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3!UBERON:0006238;2.16e-10;10!CL:0000339;3.38e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;5.15e-21;5!DOID:3093;1.22e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.15e-21,5;DOID:3093,1.22e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0002146!8.58e-14!1;UBERON:0005623!8.58e-14!1;UBERON:0006955!9.87e-08!2;UBERON:0004801!9.87e-08!2;UBERON:0001954!2.40e-07!2;UBERON:0003022!2.40e-07!2;UBERON:0002421!2.40e-07!2;UBERON:0002600!2.40e-07!2 | |ontology_enrichment_uberon=UBERON:0002146!8.58e-14!1;UBERON:0005623!8.58e-14!1;UBERON:0006955!9.87e-08!2;UBERON:0004801!9.87e-08!2;UBERON:0001954!2.40e-07!2;UBERON:0003022!2.40e-07!2;UBERON:0002421!2.40e-07!2;UBERON:0002600!2.40e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;4.52e-50;2!UBERON:0004801;4.52e-50;2!UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000002;9.07e-18;6!UBERON:0001560;9.07e-18;6!UBERON:0000995;3.58e-07;17!UBERON:0003975;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,4.52e-50,2;UBERON:0004801,4.52e-50,2;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000002,9.07e-18,6;UBERON:0001560,9.07e-18,6 | |||
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|short_description=p@chr18:40215689..40215694,+ | |short_description=p@chr18:40215689..40215694,+ | ||
}} | }} |
Latest revision as of 00:54, 26 July 2015
Short description: | p@chr18:40215689..40215694, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:40215689..40215694, + |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.52e-50 | 2 |
glial cell (sensu Vertebrata) | 3.38e-07 | 15 |
glial cell | 3.38e-07 | 15 |
glioblast | 3.38e-07 | 15 |
glioblast (sensu Vertebrata) | 3.38e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 4.52e-50 | 2 |
cervix epithelium | 4.52e-50 | 2 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
uterine cervix | 9.07e-18 | 6 |
neck of organ | 9.07e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.15e-21 | 5 |
nervous system cancer | 1.22e-09 | 11 |