FFCP PHASE1:Hg19::chr18:53146977..53146999,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:53146977..53146999,-
|short_description=p@chr18:53146977..53146999,-
|description=CAGE_peak_at_chr18:53146977..53146999,-
|association_with_transcript=NA
...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:53146977..53146999,- | |||
|description=CAGE_peak_at_chr18:53146977..53146999,- | |||
|id=chr18:53146977..53146999,- | |||
|ontology_enrichment_celltype=CL:0002139!2.01e-23!24;CL:0000071!1.92e-17!18;CL:0002546!1.92e-17!18;CL:0000115!8.56e-15!35;CL:0002543!1.42e-12!6;CL:0002078!5.60e-11!44;CL:1000413!6.06e-11!9;CL:0002618!4.30e-10!3;CL:0000213!1.21e-07!57;CL:0000215!1.21e-07!57;CL:0005020!1.51e-07!6;CL:0002138!1.51e-07!6;CL:0005022!1.51e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002618;4.71e-75;3!CL:0002543;4.90e-38;6!CL:0000071;1.38e-22;18!CL:0002139;4.42e-17;24!CL:0000115;1.15e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,4.72e-75,3;CL:0002543,4.90e-38,6;CL:0000071,1.46e-22,18;CL:0002546,1.46e-22,18;CL:0002139,4.61e-17,24;CL:0000115,1.55e-11,36;CL:0002078,2.59e-09,45;CL:0000213,2.63e-07,58;CL:0000215,2.63e-07,58;CL:0000076,9.40e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.38e-22;18!UBERON:0005062;1.98e-07;4!UBERON:0007284;1.98e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.16e-38!115;UBERON:0004111!1.32e-23!241;UBERON:0000025!7.55e-21!194;UBERON:0001049!2.89e-19!57;UBERON:0005068!2.89e-19!57;UBERON:0006241!2.89e-19!57;UBERON:0007135!2.89e-19!57;UBERON:0000477!1.47e-18!286;UBERON:0001986!1.92e-17!18;UBERON:0004638!1.92e-17!18;UBERON:0004852!1.92e-17!18;UBERON:0002780!2.83e-17!41;UBERON:0001890!2.83e-17!41;UBERON:0006240!2.83e-17!41;UBERON:0003080!9.29e-17!42;UBERON:0002616!1.17e-16!59;UBERON:0001017!3.56e-15!82;UBERON:0001893!9.38e-15!34;UBERON:0000955!1.71e-14!69;UBERON:0006238!1.71e-14!69;UBERON:0005743!3.60e-14!86;UBERON:0001869!6.51e-14!32;UBERON:0000487!8.79e-14!22;UBERON:0002791!2.34e-13!33;UBERON:0003075!3.00e-13!86;UBERON:0007284!3.00e-13!86;UBERON:0002020!4.29e-13!34;UBERON:0003528!4.29e-13!34;UBERON:0002346!2.22e-12!90;UBERON:0000073!3.18e-12!94;UBERON:0001016!3.18e-12!94;UBERON:0000483!5.79e-12!309;UBERON:0006914!8.20e-12!25;UBERON:0000119!1.00e-11!312;UBERON:0002619!2.41e-11!22;UBERON:0003915!6.06e-11!9;UBERON:0004700!6.06e-11!9;UBERON:0001917!6.06e-11!9;UBERON:0001950!2.91e-10!20;UBERON:0003056!3.55e-10!61;UBERON:0000956!9.12e-10!25;UBERON:0000203!9.12e-10!25;UBERON:0004151!1.14e-09!3;UBERON:0000055!1.04e-08!69;UBERON:0001638!3.26e-08!9;UBERON:0003920!3.26e-08!9;UBERON:0004582!3.26e-08!9;UBERON:0004872!3.49e-08!84;UBERON:0004535!1.88e-07!110;UBERON:0001009!4.13e-07!113;UBERON:0002049!4.58e-07!79;UBERON:0007798!4.58e-07!79;UBERON:0002081!4.60e-07!2;UBERON:0000200!5.94e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002066;1.89e-45;5!UBERON:0002134;1.11e-25;1!UBERON:0005208;1.11e-25;1!UBERON:0004145;1.11e-25;1!UBERON:0005946;1.11e-25;1!UBERON:0005965;1.11e-25;1!UBERON:0002078;1.11e-25;1!UBERON:0001638;1.17e-25;9!UBERON:0010260;1.17e-25;9!UBERON:0003920;1.17e-25;9!UBERON:0004582;1.17e-25;9!UBERON:0004638;1.38e-22;18!UBERON:0001986;1.38e-22;18!UBERON:0004852;1.38e-22;18!UBERON:0000487;1.39e-18;22!UBERON:0006914;2.03e-16;25!UBERON:0002081;1.46e-13;2!UBERON:0002133;1.46e-13;2!UBERON:0000490;5.18e-10;33!UBERON:0003978;1.74e-09;3!UBERON:0004151;1.74e-09;3!UBERON:0000946;1.74e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,1.89e-45,5;UBERON:0002134,9.79e-26,1;UBERON:0005208,9.79e-26,1;UBERON:0005946,9.79e-26,1;UBERON:0005965,9.79e-26,1;UBERON:0002078,9.79e-26,1;UBERON:0001638,1.17e-25,9;UBERON:0010260,1.17e-25,9;UBERON:0003920,1.17e-25,9;UBERON:0004582,1.17e-25,9;UBERON:0004638,1.46e-22,18;UBERON:0001986,1.46e-22,18;UBERON:0004852,1.46e-22,18;UBERON:0000487,1.45e-18,22;UBERON:0006914,2.12e-16,25;UBERON:0002081,1.37e-13,2;UBERON:0002133,1.37e-13,2;UBERON:0010227,1.37e-13,2;UBERON:0007500,8.72e-11,59;UBERON:0001981,8.72e-11,59;UBERON:0004537,8.72e-11,59;UBERON:0006965,8.72e-11,59;UBERON:0003978,1.67e-09,3;UBERON:0009751,1.67e-09,3;UBERON:0004151,1.67e-09,3;UBERON:0000946,1.67e-09,3;UBERON:0002523,1.67e-09,3;UBERON:0005983,1.67e-09,3;UBERON:0004145,1.67e-09,3;UBERON:0002165,1.67e-09,3;UBERON:0002062,1.67e-09,3;UBERON:0007280,1.67e-09,3;UBERON:0000055,2.19e-09,68;UBERON:0002049,3.31e-08,78;UBERON:0007798,3.31e-08,78;UBERON:0004872,1.01e-07,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0,0.419499436209906,2.20094433552054,0.208994966536811,0.258416759169329,0.71153252537342,0,0,0,0,0,0,3.30408994651095,3.14341121676638,3.0405099730497,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.653847612453835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,1.43574604915363,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.182248669974074,0,0,0,0,0.717149357331379,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,2.56289790162467,2.51526888159466,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.517164979309476,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0.694281003215189,0,0.419499436209906,2.20094433552054,0.208994966536811,0.258416759169329,0.71153252537342,0,0,0,0,0,0,3.30408994651095,3.14341121676638,3.0405099730497,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.653847612453835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,1.43574604915363,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0,0,0,0,0,0.182248669974074,0,0,0,0,0.717149357331379,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,2.56289790162467,2.51526888159466,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.319267718114302,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.227662191351298,0.266107110487916,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513314034281235,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0.517164979309476,0.213233981900981,0,0,0,0,0.12729431655633,0,0,0,0.0673520530145875,0.430333232356058,0,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | ||
|short_description=p@chr18:53146977..53146999,- | |||
}} | }} |
Latest revision as of 01:24, 26 July 2015
Short description: | p@chr18:53146977..53146999, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:53146977..53146999, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 4.72e-75 | 3 |
vein endothelial cell | 4.90e-38 | 6 |
blood vessel endothelial cell | 1.46e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.46e-22 | 18 |
endothelial cell of vascular tree | 4.61e-17 | 24 |
endothelial cell | 1.55e-11 | 36 |
meso-epithelial cell | 2.59e-09 | 45 |
lining cell | 2.63e-07 | 58 |
barrier cell | 2.63e-07 | 58 |
squamous epithelial cell | 9.40e-07 | 63 |