FFCP PHASE1:Hg19::chr18:74073027..74073036,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=9658 | |EntrezGene=entrezgene:9658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | ||
|HGNC=28990 | |HGNC=HGNC:28990 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-86bp_to_D16475_5end | |association_with_transcript=-86bp_to_D16475_5end | ||
|cluster_id=chr18:74073027..74073036,- | |||
|coexpression_cluster_id=C87 | |coexpression_cluster_id=C87 | ||
|description=CAGE_peak_14_at_ZNF516_5end | |description=CAGE_peak_14_at_ZNF516_5end | ||
Revision as of 02:11, 26 July 2015
| Short description: | p14@ZNF516 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_14_at_ZNF516_5end |
| Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
| Association with transcript: | -86bp_to_D16475_5end |
| EntrezGene: | 9658 |
| HGNC: | 28990 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p14@ZNF516 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
| glial cell | 4.22e-13 | 15 |
| glioblast | 4.22e-13 | 15 |
| glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
| neuron associated cell | 6.95e-12 | 17 |
| neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
| neural cell | 8.32e-09 | 25 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| retina | 4.27e-34 | 6 |
| photoreceptor array | 4.27e-34 | 6 |
| posterior segment of eyeball | 4.27e-34 | 6 |
| camera-type eye | 2.29e-11 | 20 |
| simple eye | 2.29e-11 | 20 |
| immature eye | 2.29e-11 | 20 |
| ocular region | 2.29e-11 | 20 |
| eyeball of camera-type eye | 2.29e-11 | 20 |
| optic cup | 2.29e-11 | 20 |
| optic vesicle | 2.29e-11 | 20 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system cancer | 6.76e-18 | 11 |
Showing 1 to 1 of 1 entries
