FFCP PHASE1:Hg19::chr18:74817666..74817686,-: Difference between revisions
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|id=chr18:74817666..74817686,-
|short_description=p2@AB463902,p2@CU688026
|description=CAGE_peak_2_at_AB463902_5end,CAGE_peak_2_at_CU688026_5end
|association_with_t...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-449bp_to_AB463902,CU688026_5end | |||
|cluster_id=chr18:74817666..74817686,- | |||
|coexpression_cluster_id=C387 | |||
|description=CAGE_peak_2_at_AB463902_5end,CAGE_peak_2_at_CU688026_5end | |||
|id=chr18:74817666..74817686,- | |||
|ontology_enrichment_celltype=CL:0002334!4.36e-20!12;CL:0002579!5.63e-11!3;CL:0002580!1.00e-10!3;CL:0002582!3.34e-09!3;CL:0000197!5.96e-08!6;CL:0000098!5.96e-08!6;CL:0002167!5.96e-08!6;CL:1000306!2.41e-07!4;CL:0002547!2.41e-07!4;CL:0000077!7.10e-07!19;CL:0000057!9.07e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002579;1.46e-50;3!CL:0002334;1.08e-34;12!CL:0002580;4.35e-23;3!CL:0000511;9.48e-18;1!CL:0002625;9.48e-18;1!CL:0000216;9.48e-18;1!CL:0002616;9.48e-18;1!CL:0002097;1.51e-09;2!CL:0000174;8.86e-07;3!CL:0000632;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,2.64e-50,3;CL:0002334,1.54e-34,12;CL:0002580,5.15e-23,3;CL:0002616,6.23e-18,1;CL:0000511,8.72e-18,1;CL:0002625,8.72e-18,1;CL:0000216,8.72e-18,1;CL:0002097,1.33e-09,2;CL:0000057,1.17e-07,76;CL:0000174,8.15e-07,3;CL:0000632,9.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;4.44e-18;1!DOID:1192;6.88e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,4.44e-18,1;DOID:1192,6.88e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003688!1.34e-13!6;UBERON:0002358!1.34e-13!6;UBERON:0003684!1.34e-13!6;UBERON:0001178!1.34e-13!6;UBERON:0004457!6.00e-09!12;UBERON:0000042!6.00e-09!12;UBERON:0000415!2.41e-07!4;UBERON:0007240!2.41e-07!4;UBERON:0005742!2.41e-07!4;UBERON:0005734!2.41e-07!4;UBERON:0004664!2.41e-07!4;UBERON:0004663!2.41e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.05e-25;6!UBERON:0002358;1.05e-25;6!UBERON:0003684;1.05e-25;6!UBERON:0001178;1.05e-25;6!UBERON:0001136;9.48e-18;1!UBERON:0001343;9.48e-18;1!UBERON:0004910;9.48e-18;1!UBERON:0004813;9.48e-18;1!UBERON:0004457;2.21e-17;9!UBERON:0000042;2.21e-17;9!UBERON:0004909;1.51e-09;2!UBERON:0005406;1.51e-09;2!UBERON:0000310;1.35e-07;10!UBERON:0001443;5.55e-07;11!UBERON:0002369;8.86e-07;3!UBERON:0001235;8.86e-07;3!UBERON:0006858;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.41e-25,6;UBERON:0002358,1.41e-25,6;UBERON:0003684,1.41e-25,6;UBERON:0001178,1.41e-25,6;UBERON:0001136,8.72e-18,1;UBERON:0001343,8.72e-18,1;UBERON:0004910,8.72e-18,1;UBERON:0005154,8.72e-18,1;UBERON:0005295,8.72e-18,1;UBERON:0004813,8.72e-18,1;UBERON:0005297,8.72e-18,1;UBERON:0005294,8.72e-18,1;UBERON:0010141,8.72e-18,1;UBERON:0005891,8.72e-18,1;UBERON:0004457,3.85e-13,12;UBERON:0000042,3.85e-13,12;UBERON:0005406,1.22e-09,2;UBERON:0004909,1.44e-09,2;UBERON:0000310,1.42e-07,10;UBERON:0001443,5.81e-07,11;UBERON:0002417,6.05e-07,60;UBERON:0000916,6.05e-07,60;UBERON:0009569,7.70e-07,112;UBERON:0002369,8.15e-07,3;UBERON:0001235,8.15e-07,3;UBERON:0006858,8.15e-07,3 | |||
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|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98183171017191,0.379891534993739,0.132409180813219,0.860509862246441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0.904902010304444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.535286966391485,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2254015016441,0.767309866440312,1.40330047216537,4.22859192543813,1.02341449813341,4.66476371316462,0,0,0,0.164254312027618,0.519254429183621,0.116210378459959,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.23874448473769,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.467426619694449,0.554805861502613,0,0,0,0.686520205190771,0.151230923763239,0,0,0,0,0,0.829412415681711,1.32920857278997,0,0,1.90402606084398,0,0,0,0.464033759878494,0.398095888698616,0,0.343395705182793,0,0,0,1.71553273099941,0,0,0.231522474323834,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.849635573439084,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@AB463902,p2@CU688026 | |||
}} | }} |
Latest revision as of 02:24, 26 July 2015
Short description: | p2@AB463902, p2@CU688026 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AB463902_5end, CAGE_peak_2_at_CU688026_5end |
Coexpression cluster: | C387_Preadipocyte_Fibroblast_Adipocyte_tenocyte_Synoviocyte_mesothelioma_Ewing |
Association with transcript: | -449bp_to_AB463902, CU688026_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 2.64e-50 | 3 |
preadipocyte | 1.54e-34 | 12 |
preadipocyte of the breast | 5.15e-23 | 3 |
perirenal adipocyte cell | 6.23e-18 | 1 |
androgen binding protein secreting cell | 8.72e-18 | 1 |
seminiferous tubule epithelial cell | 8.72e-18 | 1 |
Sertoli cell | 8.72e-18 | 1 |
cortical cell of adrenal gland | 1.33e-09 | 2 |
fibroblast | 1.17e-07 | 76 |
steroid hormone secreting cell | 8.15e-07 | 3 |
hepatic stellate cell | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.41e-25 | 6 |
peritoneum | 1.41e-25 | 6 |
abdominal cavity | 1.41e-25 | 6 |
visceral peritoneum | 1.41e-25 | 6 |
mesothelium | 8.72e-18 | 1 |
seminiferous tubule of testis | 8.72e-18 | 1 |
epithelium of male gonad | 8.72e-18 | 1 |
epithelial cord | 8.72e-18 | 1 |
sex cord | 8.72e-18 | 1 |
seminiferous tubule epithelium | 8.72e-18 | 1 |
testis sex cord | 8.72e-18 | 1 |
genital ridge | 8.72e-18 | 1 |
primitive sex cord of indifferent gonad | 8.72e-18 | 1 |
coelomic epithelium | 8.72e-18 | 1 |
cavity lining | 3.85e-13 | 12 |
serous membrane | 3.85e-13 | 12 |
perirenal fat | 1.22e-09 | 2 |
epithelium of gonad | 1.44e-09 | 2 |
breast | 1.42e-07 | 10 |
chest | 5.81e-07 | 11 |
abdominal segment of trunk | 6.05e-07 | 60 |
abdomen | 6.05e-07 | 60 |
subdivision of trunk | 7.70e-07 | 112 |
adrenal gland | 8.15e-07 | 3 |
adrenal cortex | 8.15e-07 | 3 |
adrenal/interrenal gland | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 4.44e-18 | 1 |
peripheral nervous system neoplasm | 6.88e-07 | 3 |