FFCP PHASE1:Hg19::chr19:13359221..13359224,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:13359221..13359224,-
|short_description=p@chr19:13359221..13359224,-
|description=CAGE_peak_at_chr19:13359221..13359224,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:13359221..13359224,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr19:13359221..13359224,- | |||
|id=chr19:13359221..13359224,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.07e-18;2!CL:0002535;9.07e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,7.67e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.11e-98;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;6.55e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.13e-08,5 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;6.35e-50;6!UBERON:0002680;1.24e-33;9!UBERON:0001895;1.24e-33;9!UBERON:0004733;1.81e-25;12!UBERON:0002028;1.81e-25;12!UBERON:0004732;1.39e-23;13!UBERON:0006955;9.07e-18;2!UBERON:0004801;9.07e-18;2!UBERON:0000002;8.48e-07;6!UBERON:0001560;8.48e-07;6 | |||
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| ||
|short_description=p@chr19:13359221..13359224,- | |||
}} | }} |
Latest revision as of 04:05, 26 July 2015
Short description: | p@chr19:13359221..13359224, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13359221..13359224, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 7.67e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.55e-50 | 6 |
rhombic lip | 4.55e-50 | 6 |
regional part of metencephalon | 9.92e-34 | 9 |
metencephalon | 9.92e-34 | 9 |
future metencephalon | 9.92e-34 | 9 |
segmental subdivision of hindbrain | 1.53e-25 | 12 |
hindbrain | 1.53e-25 | 12 |
presumptive hindbrain | 1.53e-25 | 12 |
segmental subdivision of nervous system | 1.19e-23 | 13 |
posterior neural tube | 1.28e-20 | 15 |
chordal neural plate | 1.28e-20 | 15 |
uterine epithelium | 7.67e-18 | 2 |
cervix epithelium | 7.67e-18 | 2 |
central nervous system | 6.43e-07 | 81 |
uterine cervix | 8.02e-07 | 6 |
neck of organ | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.13e-08 | 5 |