FFCP PHASE1:Hg19::chr19:20349209..20349221,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:20349209..20349221,- | |||
|coexpression_cluster_id=C196 | |coexpression_cluster_id=C196 | ||
|description=CAGE_peak_at_chr19:20349209..20349221,- | |description=CAGE_peak_at_chr19:20349209..20349221,- | ||
|id=chr19:20349209..20349221,- | |id=chr19:20349209..20349221,- | ||
|ontology_enrichment_celltype=CL:0000039!2.78e-09!7;CL:0000586!2.78e-09!7;CL:0002322!7.26e-08!5 | |ontology_enrichment_celltype=CL:0000039!2.78e-09!7;CL:0000586!2.78e-09!7;CL:0002322!7.26e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;7.14e-37;5!CL:0000039;6.88e-17;7!CL:0000586;6.88e-17;7!CL:0002321;3.33e-12;15!CL:0000540;1.11e-11;6!CL:0000404;1.11e-11;6!CL:0000148;3.18e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.92e-37,5;CL:0000039,8.12e-17,7;CL:0000586,8.12e-17,7;CL:0000540,1.13e-11,6;CL:0000031,1.13e-11,6;CL:0000404,1.13e-11,6;CL:0000047,7.11e-09,8;CL:0000148,3.18e-07,10;CL:0000541,3.18e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.07e-12;10!UBERON:0005564;7.07e-12;10!CL:0000031;1.11e-11;6!UBERON:0001045;2.46e-08;1 | |||
|ontology_enrichment_disease=DOID:2531!5.07e-07!51;DOID:0060083!5.07e-07!51;DOID:0060058!6.17e-07!10 | |ontology_enrichment_disease=DOID:2531!5.07e-07!51;DOID:0060083!5.07e-07!51;DOID:0060058!6.17e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2355;1.37e-08;1!DOID:3095;4.06e-08;22!DOID:2994;4.06e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.37e-08,1;DOID:3095,4.32e-08,22;DOID:2994,4.32e-08,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.38e-15;8!UBERON:0003135;8.24e-11;11!UBERON:0001154;2.46e-08;1!UBERON:0001153;2.46e-08;1!UBERON:0007195;2.46e-08;1!UBERON:0009854;2.46e-08;1!UBERON:0000922;4.51e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.68e-15,8;UBERON:0003135,9.14e-11,11;UBERON:0001154,1.59e-08,1;UBERON:0001153,1.59e-08,1;UBERON:0001045,1.59e-08,1;UBERON:0007195,3.28e-08,1 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.821246550437305,0.502170558379211,0.0764134057479513,0.246301768349837,0,0,0,0,0,0.30120591877825,0,0.387336002901508,0.284338464974843,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0,0.735326160691737,0,0.446498641420399,0.22452937262617,0.788280363383256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.421352420106746,0,0,0,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,7.56236978003491,5.83130980614535,9.52790331530051,3.93912009058408,11.6067591402789,10.2193660541232,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.7333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0.112085143993527,0.394061520403854,0,0,0.508189248444927,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.574072240823034,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.770243085573222,0.15350367472613,0,0.214840489736547,0.145016693914229,0.340906509664404,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.577076851905779,1.28055318027145,0,0.997896857164083,0.5745161103971,0.635020748171649,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0.447352215784832,0.834245708559542,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0.222886768554957,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0,0,0.227884111694002,0.46112780877612,0.359030577639089,0.760531603454056,0,0,0,0,0.470940769185074,0,0.902382642468723,0,0.167821586975843,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,1.13843818411917,0,0.347119476670262,0,0,0,0.859930162358083,0,0,0,0,0,0,0,0.794858446811959,0,1.95551382734803,0,0,0.39961921916426,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,2.03215996957883,0,0,8.84142316557605,5.22649859069488,6.23160507043778,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.246277562248017,0,0,0,0,0.258565912723101,0,0,0,0,0.314408610199332,0.414239055347196,0.496166021811951,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12482367165896,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,1.28664954824955,0.782982875895635,0,0,0.97894681802587,0,0,0,0.883445729729405,0,0.506827321959218,0.256241518587947,1.0362910251936,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.327628914576042,0,0,0.371807292777007,0,0,0.788617450012533,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0.215927591218621,0,0.142953088353313,0.790068058663633,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9169507383663,0,35.1861462609837,1.06886962106224,23.4331993813855,1.25353769646188,0.0757786982182394,0,0,0,0.213233981900981,0.714193294391221,0.129177819672012,0.31037357147929,0,0.572824424503484,0.404234377916439,0.217716747896961,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.821246550437305,0.502170558379211,0.0764134057479513,0.246301768349837,0,0,0,0,0,0.30120591877825,0,0.387336002901508,0.284338464974843,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.66944122552934,0,0,0,0.735326160691737,0,0.446498641420399,0.22452937262617,0.788280363383256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0.421352420106746,0,0,0,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,7.56236978003491,5.83130980614535,9.52790331530051,3.93912009058408,11.6067591402789,10.2193660541232,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.102827492703324,0,0,0.448524337381443,0,0.7333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0.112085143993527,0.394061520403854,0,0,0.508189248444927,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.574072240823034,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0.096670718292122,0.770243085573222,0.15350367472613,0,0.214840489736547,0.145016693914229,0.340906509664404,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0.577076851905779,1.28055318027145,0,0.997896857164083,0.5745161103971,0.635020748171649,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0.447352215784832,0.834245708559542,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0.222886768554957,0,0,0,0,0,0,0,0,0,0,1.65770349318689,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0.694499979733169,0,0,0,0,0,0,0,0,0,0.227884111694002,0.46112780877612,0.359030577639089,0.760531603454056,0,0,0,0,0.470940769185074,0,0.902382642468723,0,0.167821586975843,0.189753732724185,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,1.13843818411917,0,0.347119476670262,0,0,0,0.859930162358083,0,0,0,0,0,0,0,0.794858446811959,0,1.95551382734803,0,0,0.39961921916426,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,2.03215996957883,0,0,8.84142316557605,5.22649859069488,6.23160507043778,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0.246277562248017,0,0,0,0,0.258565912723101,0,0,0,0,0.314408610199332,0.414239055347196,0.496166021811951,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12482367165896,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,1.28664954824955,0.782982875895635,0,0,0.97894681802587,0,0,0,0.883445729729405,0,0.506827321959218,0.256241518587947,1.0362910251936,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0.327628914576042,0,0,0.371807292777007,0,0,0.788617450012533,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0.156986185701028,0,0,0,0.215927591218621,0,0.142953088353313,0.790068058663633,0,0,0,0,0,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0.799529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9169507383663,0,35.1861462609837,1.06886962106224,23.4331993813855,1.25353769646188,0.0757786982182394,0,0,0,0.213233981900981,0.714193294391221,0.129177819672012,0.31037357147929,0,0.572824424503484,0.404234377916439,0.217716747896961,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:20349209..20349221,- | |short_description=p@chr19:20349209..20349221,- | ||
}} | }} |
Latest revision as of 05:36, 26 July 2015
Short description: | p@chr19:20349209..20349221, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:20349209..20349221, - |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.92e-37 | 5 |
germ line cell | 8.12e-17 | 7 |
germ cell | 8.12e-17 | 7 |
neuron | 1.13e-11 | 6 |
neuroblast | 1.13e-11 | 6 |
electrically signaling cell | 1.13e-11 | 6 |
neuronal stem cell | 7.11e-09 | 8 |
melanocyte | 3.18e-07 | 10 |
melanoblast | 3.18e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 9.68e-15 | 8 |
male reproductive organ | 9.14e-11 | 11 |
vermiform appendix | 1.59e-08 | 1 |
caecum | 1.59e-08 | 1 |
midgut | 1.59e-08 | 1 |
stroma of bone marrow | 3.28e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.37e-08 | 1 |
germ cell and embryonal cancer | 4.32e-08 | 22 |
germ cell cancer | 4.32e-08 | 22 |