FFCP PHASE1:Hg19::chr19:3285896..3285925,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:3285896..3285925,+ | |||
|description=CAGE_peak_at_chr19:3285896..3285925,+ | |description=CAGE_peak_at_chr19:3285896..3285925,+ | ||
|id=chr19:3285896..3285925,+ | |id=chr19:3285896..3285925,+ | ||
|ontology_enrichment_celltype=CL:0000039!7.42e-10!7;CL:0000586!7.42e-10!7;CL:0002322!2.27e-08!5;CL:0000223!9.15e-08!59;CL:0000066!9.92e-08!254 | |ontology_enrichment_celltype=CL:0000039!7.42e-10!7;CL:0000586!7.42e-10!7;CL:0002322!2.27e-08!5;CL:0000223!9.15e-08!59;CL:0000066!9.92e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.84e-21;5!CL:0000039;2.25e-14;7!CL:0000586;2.25e-14;7!CL:0002321;7.85e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.19e-21,5;CL:0000039,1.75e-14,7;CL:0000586,1.75e-14,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;9.33e-19;10!UBERON:0005564;9.33e-19;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.72e-12!143;DOID:305!1.38e-10!106 | |ontology_enrichment_disease=DOID:0050687!1.72e-12!143;DOID:305!1.38e-10!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.35e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0005177!7.24e-10!107;UBERON:0000466!1.96e-09!126;UBERON:0000464!2.27e-08!104;UBERON:0003101!3.63e-08!22;UBERON:0000079!3.63e-08!22;UBERON:0000473!5.11e-08!8;UBERON:0002553!1.06e-07!70;UBERON:0005172!2.22e-07!55;UBERON:0005173!2.22e-07!55;UBERON:0002323!2.32e-07!46;UBERON:0004921!3.60e-07!129;UBERON:0004185!3.60e-07!129;UBERON:0005156!3.84e-07!59;UBERON:0000990!3.84e-07!59;UBERON:0002114!6.74e-07!12;UBERON:0003135!8.45e-07!11 | |ontology_enrichment_uberon=UBERON:0005177!7.24e-10!107;UBERON:0000466!1.96e-09!126;UBERON:0000464!2.27e-08!104;UBERON:0003101!3.63e-08!22;UBERON:0000079!3.63e-08!22;UBERON:0000473!5.11e-08!8;UBERON:0002553!1.06e-07!70;UBERON:0005172!2.22e-07!55;UBERON:0005173!2.22e-07!55;UBERON:0002323!2.32e-07!46;UBERON:0004921!3.60e-07!129;UBERON:0004185!3.60e-07!129;UBERON:0005156!3.84e-07!59;UBERON:0000990!3.84e-07!59;UBERON:0002114!6.74e-07!12;UBERON:0003135!8.45e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000991;1.96e-08;21!UBERON:0000473;6.53e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.66e-08,21;UBERON:0009196,1.66e-08,21;UBERON:0009117,1.66e-08,21;UBERON:0005564,1.66e-08,21;UBERON:0004176,4.46e-08,22;UBERON:0000473,5.52e-08,8 | |||
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| ||
|short_description=p@chr19:3285896..3285925,+ | |short_description=p@chr19:3285896..3285925,+ | ||
}} | }} |
Latest revision as of 06:13, 26 July 2015
Short description: | p@chr19:3285896..3285925, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:3285896..3285925, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.19e-21 | 5 |
germ line cell | 1.75e-14 | 7 |
germ cell | 1.75e-14 | 7 |
Ontology term | p-value | n |
---|---|---|
gonad | 1.66e-08 | 21 |
indifferent external genitalia | 1.66e-08 | 21 |
indifferent gonad | 1.66e-08 | 21 |
gonad primordium | 1.66e-08 | 21 |
external genitalia | 4.46e-08 | 22 |
testis | 5.52e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.35e-10 | 143 |