FFCP PHASE1:Hg19::chr19:34850617..34850642,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:34850617..34850642,+
|short_description=p@chr19:34850617..34850642,+
|description=CAGE_peak_at_chr19:34850617..34850642,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:34850617..34850642,+ | |||
|description=CAGE_peak_at_chr19:34850617..34850642,+ | |||
|id=chr19:34850617..34850642,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.84e-12!679;CL:0000004!4.84e-12!679;CL:0000255!4.84e-12!679;CL:0000012!1.60e-11!682;CL:0000066!7.21e-11!254;CL:0000003!4.05e-08!722;CL:0000220!1.18e-07!246;CL:0002321!2.51e-07!248;CL:0000192!4.91e-07!42;CL:0000514!4.91e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.87e-13;32!CL:0002592;1.19e-08;3!CL:0000192;1.23e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.91e-13,32;CL:0000192,2.10e-10,43;CL:0000514,2.10e-10,43;CL:0002592,1.53e-08,3;CL:0000187,2.22e-07,55;CL:0002596,7.47e-07,2;CL:0000680,7.90e-07,58;CL:0000056,7.90e-07,58;CL:0000355,7.90e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.23e-07;43 | |||
|ontology_enrichment_disease=DOID:305!4.01e-13!106;DOID:0050687!7.42e-12!143;DOID:14566!1.76e-10!239;DOID:162!2.58e-10!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.62e-09;33!UBERON:0004571;3.62e-09;33!UBERON:0003498;1.19e-08;3!UBERON:0005985;1.19e-08;3!UBERON:0001621;1.19e-08;3!UBERON:0001637;4.70e-07;42!UBERON:0003509;4.70e-07;42!UBERON:0004572;4.70e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,7.06e-11,33;UBERON:0004571,7.06e-11,33;UBERON:0001637,7.67e-11,42;UBERON:0003509,7.67e-11,42;UBERON:0004572,7.67e-11,42;UBERON:0003498,7.25e-09,5;UBERON:0005985,7.25e-09,5;UBERON:0001621,1.53e-08,3;UBERON:0005396,7.47e-07,2 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.986680828671798,1.0007329835313,0,1.74467704820074,5.06599756336621,0,0,0.737201809504527,0.697801167972428,0,0,0,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.125542639594803,2.75088260692625,1.55991119954897,2.75487734597877,0,0,0,0.919421224478927,0.6024118375565,0.739508020333575,0,0.853015394924529,0,0,0,0,0,0.32389366601898,0,0,0.755751887377619,0,0.232429036905685,0,0.619412741790207,0,0.256160706529101,0.236482229888585,1.03423704220986,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,0,0.50133791063589,0.724232594804119,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0.596287222100115,0,0,0,0,0.550236083880135,0,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,1.62028389576352,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0.993943903390637,0.379891534993739,0.794455084879313,0,0.354668382198357,0,0,0.24666754841716,0,0,0.326923806226917,0.605429710579726,0,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0.427114777637135,0.211931901159562,0,0.412210116953756,0.257640540045629,0.744467425326359,0.168776332241266,0.487185025805993,0.252433774244115,0.460249493211497,0.323292113637624,0,0.10075209822764,0.508681776931463,0.193260853163297,0.272746120590835,1.14721838155602,0,0,0.232387885739037,0.414644220061482,0.504641701751257,0,0,1.92972281457866,0,0,0,1.30137480043828,0.168584690078102,0.482022059766964,0.992645754591546,1.08939722046203,0.71181185733329,1.61797569792197,0.588664395376038,0.769494313892781,0,0,0,0,0,0,0,0,0.737930631258681,0.343135620597051,0.658501712451753,0,0.100528972411631,0,0,0,0,0.231860809950154,0.234817388471643,0.433099343283221,0,0.190254152234598,5.53143078571493,0.858486162094873,0.246217006087397,0,0,0,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0.766765358330422,0,0,0,0,0.25248486685276,0,0.763976851116555,0,0,0,0.600686115687835,0.285826432630578,0.224262168690721,0,0.07333828582095,0,3.57656445851882,0,0,0,0,0,0,1.42977993658148,0.542621605391443,0,0,1.06617584622764,0,0,0.871533458600294,0,0,0,0,0.479249710983165,2.29723871668228,0,0.434343920002738,0.205476322550383,0.716243852959582,0.672510863961164,0,0,0,0.76228387266739,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0.831883446123229,1.07057393278297,0.946214490203608,0.585707074963566,1.50473049863859,0,0,0,0.184369168541703,0,0.783204629850962,1.71571711905428,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0.992431231275107,0.61384789315225,0,0.896974044789907,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0.164254312027618,0,0,1.0877350463246,1.40354529212299,0.0920809889358963,0.34444334449382,0.364182336013434,0.262248829918848,0.902399225814824,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0.512900250232778,0,0,0.309123034943167,0.732555718546747,0.660075999364704,0,1.30012049207304,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0,0.330569830721956,0.192190067365106,0.382838137483752,0.4046311234222,1.39453664789186,1.25924938732256,0,0.924100740528266,1.59691809095107,1.73986598415015,0.37064843820784,0.572499546967965,0.372158369359667,0,0,0.511795582622668,0,1.90921948755562,3.13979456079692,0.179872457583315,0.54907405947211,0,1.2130948894399,1.58510321173008,2.10629228119491,0,0,2.11300293513511,0.409499734223957,0.424216295861138,2.26016233240486,1.65409603063837,2.65375590096488,0.438450885253763,1.15755106853338,0.655894752046633,0.405820753925408,0,1.40847801266121,0,0,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0.288666338176536,0,0,0.0941438007767792,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0.371606350251437,0,0.995985806877798,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0.334330152832435,0,0,0.296964680832639,0,0,0.140669416410513,0,0.329607748453519,0,0,0,2.51932747854276,0.20453736500431,2.09244169283818,0.311039587661807,0.179736702294654,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0,0,0.260427761085233,2.44887999989348,0,0.227586896570999,0.254253650292766,0.945550727071745,2.75794698593172,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,8.58314238183864,0,0.274792780205587,0.533034776018635,0,0,0,1.57916962432026,1.37243774022418,1.51039428278258,0,0.476809736941136,0,0.816164040795739,0.848118428603645,1.51472047819464,0,0.176915129006678,0,0,0,0.104421949505455,0.2022033989420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| ||
|short_description=p@chr19:34850617..34850642,+ | |||
}} | }} |
Latest revision as of 06:22, 26 July 2015
Short description: | p@chr19:34850617..34850642, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:34850617..34850642, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.91e-13 | 32 |
smooth muscle cell | 2.10e-10 | 43 |
smooth muscle myoblast | 2.10e-10 | 43 |
smooth muscle cell of the coronary artery | 1.53e-08 | 3 |
muscle cell | 2.22e-07 | 55 |
smooth muscle cell of the carotid artery | 7.47e-07 | 2 |
muscle precursor cell | 7.90e-07 | 58 |
myoblast | 7.90e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 7.06e-11 | 33 |
systemic arterial system | 7.06e-11 | 33 |
artery | 7.67e-11 | 42 |
arterial blood vessel | 7.67e-11 | 42 |
arterial system | 7.67e-11 | 42 |
heart blood vessel | 7.25e-09 | 5 |
coronary vessel | 7.25e-09 | 5 |
coronary artery | 1.53e-08 | 3 |
carotid artery segment | 7.47e-07 | 2 |