FFCP PHASE1:Hg19::chr19:45411811..45411830,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45411811..45411830,+ | |||
|coexpression_cluster_id=C848 | |coexpression_cluster_id=C848 | ||
|description=CAGE_peak_at_chr19:45411811..45411830,+ | |description=CAGE_peak_at_chr19:45411811..45411830,+ | ||
|id=chr19:45411811..45411830,+ | |id=chr19:45411811..45411830,+ | ||
|ontology_enrichment_celltype=CL:0000136!5.13e-09!15;CL:0000325!3.18e-08!39 | |ontology_enrichment_celltype=CL:0000136!5.13e-09!15;CL:0000325!3.18e-08!39 | ||
|ontology_enrichment_celltype_v019=CL:0000235;3.28e-17;6!CL:0000136;2.46e-16;13!CL:0000182;7.97e-13;12!CL:0002619;1.24e-09;3!CL:0002521;2.26e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.37e-17,6;CL:0000136,8.63e-14,15;CL:0000182,7.20e-13,12;CL:0002619,1.14e-09,3;CL:0002521,2.00e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.56e-11;11!UBERON:0009497;5.70e-09;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.12e-19!115;UBERON:0001017!5.83e-15!82;UBERON:0005743!6.25e-15!86;UBERON:0002616!1.95e-14!59;UBERON:0000073!1.66e-13!94;UBERON:0001016!1.66e-13!94;UBERON:0001049!1.97e-12!57;UBERON:0005068!1.97e-12!57;UBERON:0006241!1.97e-12!57;UBERON:0007135!1.97e-12!57;UBERON:0000955!2.02e-12!69;UBERON:0006238!2.02e-12!69;UBERON:0002346!1.92e-11!90;UBERON:0003075!4.03e-11!86;UBERON:0007284!4.03e-11!86;UBERON:0003080!1.08e-08!42;UBERON:0002020!1.47e-08!34;UBERON:0003528!1.47e-08!34;UBERON:0002107!3.06e-08!19;UBERON:0006925!3.06e-08!19;UBERON:0008836!3.06e-08!19;UBERON:0001893!3.53e-08!34;UBERON:0002780!4.61e-08!41;UBERON:0001890!4.61e-08!41;UBERON:0006240!4.61e-08!41;UBERON:0009854!6.09e-08!23;UBERON:0002791!7.46e-08!33;UBERON:0000924!8.51e-08!173;UBERON:0006601!8.51e-08!173;UBERON:0000153!8.68e-08!129;UBERON:0007811!8.68e-08!129;UBERON:0004121!1.77e-07!169;UBERON:0000033!1.86e-07!123;UBERON:0009856!2.00e-07!26;UBERON:0008835!2.21e-07!22;UBERON:0003894!2.21e-07!22;UBERON:0003056!3.25e-07!61;UBERON:0001869!3.76e-07!32;UBERON:0005057!5.16e-07!26;UBERON:0009497!5.70e-07!25;UBERON:0000015!5.70e-07!25;UBERON:0002423!5.70e-07!25;UBERON:0006235!5.70e-07!25;UBERON:0004161!5.70e-07!25;UBERON:0007499!6.82e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!7.12e-19!115;UBERON:0001017!5.83e-15!82;UBERON:0005743!6.25e-15!86;UBERON:0002616!1.95e-14!59;UBERON:0000073!1.66e-13!94;UBERON:0001016!1.66e-13!94;UBERON:0001049!1.97e-12!57;UBERON:0005068!1.97e-12!57;UBERON:0006241!1.97e-12!57;UBERON:0007135!1.97e-12!57;UBERON:0000955!2.02e-12!69;UBERON:0006238!2.02e-12!69;UBERON:0002346!1.92e-11!90;UBERON:0003075!4.03e-11!86;UBERON:0007284!4.03e-11!86;UBERON:0003080!1.08e-08!42;UBERON:0002020!1.47e-08!34;UBERON:0003528!1.47e-08!34;UBERON:0002107!3.06e-08!19;UBERON:0006925!3.06e-08!19;UBERON:0008836!3.06e-08!19;UBERON:0001893!3.53e-08!34;UBERON:0002780!4.61e-08!41;UBERON:0001890!4.61e-08!41;UBERON:0006240!4.61e-08!41;UBERON:0009854!6.09e-08!23;UBERON:0002791!7.46e-08!33;UBERON:0000924!8.51e-08!173;UBERON:0006601!8.51e-08!173;UBERON:0000153!8.68e-08!129;UBERON:0007811!8.68e-08!129;UBERON:0004121!1.77e-07!169;UBERON:0000033!1.86e-07!123;UBERON:0009856!2.00e-07!26;UBERON:0008835!2.21e-07!22;UBERON:0003894!2.21e-07!22;UBERON:0003056!3.25e-07!61;UBERON:0001869!3.76e-07!32;UBERON:0005057!5.16e-07!26;UBERON:0009497!5.70e-07!25;UBERON:0000015!5.70e-07!25;UBERON:0002423!5.70e-07!25;UBERON:0006235!5.70e-07!25;UBERON:0004161!5.70e-07!25;UBERON:0007499!6.82e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.13e-15;19!UBERON:0006925;4.13e-15;19!UBERON:0002423;6.93e-11;25!UBERON:0002365;8.35e-10;31!UBERON:0002330;8.35e-10;31!UBERON:0002190;2.26e-09;3!UBERON:0002368;3.40e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.78e-15,19;UBERON:0006925,3.78e-15,19;UBERON:0008836,3.78e-15,19;UBERON:0008835,9.71e-13,22;UBERON:0003894,9.71e-13,22;UBERON:0009854,4.46e-12,23;UBERON:0007499,6.50e-11,25;UBERON:0009497,6.50e-11,25;UBERON:0000015,6.50e-11,25;UBERON:0002423,6.50e-11,25;UBERON:0006235,6.50e-11,25;UBERON:0004161,6.50e-11,25;UBERON:0009856,2.12e-10,26;UBERON:0002365,5.53e-10,31;UBERON:0002330,5.53e-10,31;UBERON:0002190,2.00e-09,3;UBERON:0002368,4.04e-07,35 | |||
|phase1_expression=0.54503513781167,11.3473277662221,0.563817616383885,2.00146596706261,3.5756887554183,0,2.53299878168311,3.79031924056099,7.31319758959548,0,0,0,0,0.123766352960047,0.662794751455832,1.34465029290355,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85228086655667,4.85840499028469,3.8636335145128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.523916301990851,0,0,0,0,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0.908144565869588,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.265059536642971,1.51052125730374,0.621966330092223,1.7662459561294,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88034845542168,8.87285243752816,5.89696330006576,2.95394953340702,0,0.983907508344908,0.343135620597051,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,3.69325509131096,1.17002132569619,4.31030370637312,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.205654985406647,0.600686115687835,0.571652865261156,0,0,0,0.129271715757778,14.3062578340753,0,0,0,0,0,0,0.142977993658148,2.71310802695722,0,0,0.355391948742546,0,0,0,0.099972991182057,21.8922805154143,6.52934218861764,10.5416969741516,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,1.17480694477644,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,1.40354529212299,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,1.54561517471583,0,0,0,1.95018073810956,0,0,0.308097234229289,0.15350367472613,0,0.322260734604821,0.580066775656914,0.255679882248303,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,1.86079184679834,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0,0,0.54907405947211,0.589062011728432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0.270455678475983,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.398495976502139,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,2.17499872630438,0,0.508507300585533,0,0,0.291604613383254,0.347249989866585,0,1.32656082487949,0,0.221158519862449,1.47773809476774,2.85201016300164,0,0,0,0,0,0.179515288819544,0.54323685961004,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0.424059214301822,0,0.995261931078505,0.265372693510018,0,0,0,0,0.337005664903385,0,2.34264445725339,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,3.69992409838731,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0.85381197895741,0,0,0.114536596165916,3.60349495510126,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0,0,0.399358000997982,0,0.446342914883745,0.0671834724867263,0,1.16495949527454,1.18174773460835,1.97798060114799,1.01105315781277,0.0984274815147488,0,0,0.408610218334727,1.28602518772015,2.75078873194468,1.66176135211674,0,0,0.0607495566580247,0,0.86686278029118,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,0.164185041498678,0,0.113312091520126,4.83622371137672,11.9256200020999,0.646414781807753,1.05786081394152,0,0,0.427149650270779,0,1.24271716604159,0.992332043623902,0,0,0,2.1760712134779,0.5013797880454,2.14441903734423,3.93447156851765,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.110929051536852,0.124192805882767,0,0,1.06154382279153,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.453692771289717,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.982829546539238,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,2.35477952092104,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0.478901577171454,6.76884001994492,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0.135075169236789,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0,0,0,0,1.71488009437418,0.40781839786099,0.0657727735628491,0,0,0.156986185701028,0.471346769748006,0.280272163313789,0,0,0,0.0714765441766563,0,0.697448552208751,0,0,0,0.6828739083758,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,6.31424290976881,0,0.596852325484105,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0.588925401344836,0,8.0304588240846,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,0,1.2900562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|phase1_expression=0.54503513781167,11.3473277662221,0.563817616383885,2.00146596706261,3.5756887554183,0,2.53299878168311,3.79031924056099,7.31319758959548,0,0,0,0,0.123766352960047,0.662794751455832,1.34465029290355,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.85228086655667,4.85840499028469,3.8636335145128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0.087834785693126,0.523916301990851,0,0,0,0,1.59549552622638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0.908144565869588,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.265059536642971,1.51052125730374,0.621966330092223,1.7662459561294,2.91981887260664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88034845542168,8.87285243752816,5.89696330006576,2.95394953340702,0,0.983907508344908,0.343135620597051,0.219500570817251,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,3.69325509131096,1.17002132569619,4.31030370637312,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.205654985406647,0.600686115687835,0.571652865261156,0,0,0,0.129271715757778,14.3062578340753,0,0,0,0,0,0,0.142977993658148,2.71310802695722,0,0,0.355391948742546,0,0,0,0.099972991182057,21.8922805154143,6.52934218861764,10.5416969741516,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,1.17480694477644,2.74514739048685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,1.40354529212299,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,1.54561517471583,0,0,0,1.95018073810956,0,0,0.308097234229289,0.15350367472613,0,0.322260734604821,0.580066775656914,0.255679882248303,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,1.86079184679834,0.316379424718726,0.571890581771475,0,0.42793898803392,0,0,0,0.54907405947211,0.589062011728432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0.270455678475983,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.398495976502139,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,2.17499872630438,0,0.508507300585533,0,0,0.291604613383254,0.347249989866585,0,1.32656082487949,0,0.221158519862449,1.47773809476774,2.85201016300164,0,0,0,0,0,0.179515288819544,0.54323685961004,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0,0,0.424059214301822,0,0.995261931078505,0.265372693510018,0,0,0,0,0.337005664903385,0,2.34264445725339,0,0,0,0,0,0.61214552326098,0.063186579628488,0,0,0,0,0,0,3.69992409838731,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0.379864775735272,0,0,0.85381197895741,0,0,0.114536596165916,3.60349495510126,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.558564802544508,0,0,0.399358000997982,0,0.446342914883745,0.0671834724867263,0,1.16495949527454,1.18174773460835,1.97798060114799,1.01105315781277,0.0984274815147488,0,0,0.408610218334727,1.28602518772015,2.75078873194468,1.66176135211674,0,0,0.0607495566580247,0,0.86686278029118,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0,0,0.164185041498678,0,0.113312091520126,4.83622371137672,11.9256200020999,0.646414781807753,1.05786081394152,0,0,0.427149650270779,0,1.24271716604159,0.992332043623902,0,0,0,2.1760712134779,0.5013797880454,2.14441903734423,3.93447156851765,0,0,0.244052529803926,0.250381861413,0.573409195690071,0.110929051536852,0.124192805882767,0,0,1.06154382279153,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0.453692771289717,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.982829546539238,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,2.35477952092104,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0.478901577171454,6.76884001994492,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0.135075169236789,0.781078098613847,0.206686796501184,0.126831620387814,0,0,0,0,0,0,0.336283722218824,0,0,0,0,1.71488009437418,0.40781839786099,0.0657727735628491,0,0,0.156986185701028,0.471346769748006,0.280272163313789,0,0,0,0.0714765441766563,0,0.697448552208751,0,0,0,0.6828739083758,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,6.31424290976881,0,0.596852325484105,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0.588925401344836,0,8.0304588240846,0,0.375935671919414,0.0644578879735772,0,0,0,0,0,0,1.2900562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| ||
|short_description=p@chr19:45411811..45411830,+ | |short_description=p@chr19:45411811..45411830,+ | ||
}} | }} |
Latest revision as of 14:47, 27 July 2015
Short description: | p@chr19:45411811..45411830, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45411811..45411830, + |
Coexpression cluster: | C848_Monocytederived_Mesenchymal_Hepatocyte_Adipocyte_CD14_Cardiac_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.37e-17 | 6 |
fat cell | 8.63e-14 | 15 |
hepatocyte | 7.20e-13 | 12 |
adult endothelial progenitor cell | 1.14e-09 | 3 |
subcutaneous fat cell | 2.00e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 3.78e-15 | 19 |
digestive gland | 3.78e-15 | 19 |
liver bud | 3.78e-15 | 19 |
hepatic diverticulum | 9.71e-13 | 22 |
liver primordium | 9.71e-13 | 22 |
digestive tract diverticulum | 4.46e-12 | 23 |
epithelial sac | 6.50e-11 | 25 |
epithelium of foregut-midgut junction | 6.50e-11 | 25 |
anatomical boundary | 6.50e-11 | 25 |
hepatobiliary system | 6.50e-11 | 25 |
foregut-midgut junction | 6.50e-11 | 25 |
septum transversum | 6.50e-11 | 25 |
sac | 2.12e-10 | 26 |
exocrine gland | 5.53e-10 | 31 |
exocrine system | 5.53e-10 | 31 |
subcutaneous adipose tissue | 2.00e-09 | 3 |
endocrine gland | 4.04e-07 | 35 |