FFCP PHASE1:Hg19::chr19:47430721..47430732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:47430721..47430732,+ | |||
|description=CAGE_peak_at_chr19:47430721..47430732,+ | |description=CAGE_peak_at_chr19:47430721..47430732,+ | ||
|id=chr19:47430721..47430732,+ | |id=chr19:47430721..47430732,+ | ||
|ontology_enrichment_celltype=CL:0002076!8.06e-30!43;CL:0002368!4.07e-28!13;CL:0000223!1.27e-22!59;CL:0002159!1.91e-22!13;CL:0002202!5.96e-15!9;CL:0002632!5.96e-15!9;CL:0000066!4.23e-14!254;CL:0002328!2.46e-12!3;CL:0000068!3.45e-12!3;CL:0000069!3.45e-12!3;CL:0000307!3.45e-12!3;CL:0000377!3.45e-12!3;CL:0000362!4.33e-12!8;CL:0002621!5.21e-12!3;CL:0002077!1.48e-11!33;CL:0000240!3.11e-10!6;CL:0000311!3.11e-10!6;CL:0000079!3.11e-10!6;CL:0000237!3.11e-10!6;CL:0000036!3.11e-10!6;CL:0000357!3.11e-10!6;CL:0000114!3.11e-10!6;CL:0000220!6.95e-10!246;CL:0000076!7.17e-10!62;CL:0002251!8.61e-10!21;CL:0002321!9.67e-10!248;CL:0000317!4.09e-09!2;CL:1000448!4.09e-09!2;CL:0002308!4.09e-09!2;CL:0002140!4.09e-09!2;CL:0000575!1.34e-08!2;CL:0000312!1.86e-07!5 | |ontology_enrichment_celltype=CL:0002076!8.06e-30!43;CL:0002368!4.07e-28!13;CL:0000223!1.27e-22!59;CL:0002159!1.91e-22!13;CL:0002202!5.96e-15!9;CL:0002632!5.96e-15!9;CL:0000066!4.23e-14!254;CL:0002328!2.46e-12!3;CL:0000068!3.45e-12!3;CL:0000069!3.45e-12!3;CL:0000307!3.45e-12!3;CL:0000377!3.45e-12!3;CL:0000362!4.33e-12!8;CL:0002621!5.21e-12!3;CL:0002077!1.48e-11!33;CL:0000240!3.11e-10!6;CL:0000311!3.11e-10!6;CL:0000079!3.11e-10!6;CL:0000237!3.11e-10!6;CL:0000036!3.11e-10!6;CL:0000357!3.11e-10!6;CL:0000114!3.11e-10!6;CL:0000220!6.95e-10!246;CL:0000076!7.17e-10!62;CL:0002251!8.61e-10!21;CL:0002321!9.67e-10!248;CL:0000317!4.09e-09!2;CL:1000448!4.09e-09!2;CL:0002308!4.09e-09!2;CL:0002140!4.09e-09!2;CL:0000575!1.34e-08!2;CL:0000312!1.86e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002368;3.56e-50;13!CL:0000317;1.41e-22;2!CL:1000448;1.41e-22;2!CL:0002308;1.41e-22;2!CL:0002140;1.41e-22;2!CL:0002076;5.18e-21;42!CL:0000362;3.33e-19;9!CL:0002202;7.70e-19;9!CL:0002632;7.70e-19;9!CL:0002159;7.87e-19;14!CL:0002328;6.31e-15;3!CL:0000307;6.31e-15;3!CL:0002621;6.31e-15;3!CL:0000622;1.34e-09;5!CL:0000312;2.22e-09;5!CL:0000154;3.83e-08;6!CL:0000240;5.84e-08;6!CL:0000311;5.84e-08;6!CL:0000079;5.84e-08;6!CL:0000237;5.84e-08;6!CL:0002077;1.38e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.34e-50,13;CL:0002076,1.88e-23,42;CL:0000317,1.66e-22,2;CL:1000448,1.66e-22,2;CL:0002308,1.66e-22,2;CL:0002140,1.66e-22,2;CL:0000362,3.33e-19,9;CL:0002159,8.33e-19,14;CL:0002202,8.46e-19,9;CL:0002632,8.46e-19,9;CL:0000223,1.27e-16,58;CL:0002328,6.10e-15,3;CL:0000068,7.53e-15,3;CL:0000069,7.53e-15,3;CL:0000307,7.53e-15,3;CL:0000377,7.53e-15,3;CL:0002621,8.08e-15,3;CL:0000066,1.37e-09,253;CL:0000622,1.42e-09,5;CL:0000312,2.08e-09,5;CL:0000154,4.04e-08,6;CL:0000240,5.55e-08,6;CL:0000311,5.55e-08,6;CL:0000079,5.55e-08,6;CL:0000237,5.55e-08,6;CL:0000036,5.55e-08,6;CL:0000357,5.55e-08,6;CL:0000114,5.55e-08,6;CL:0002077,1.10e-07,34;CL:0002321,3.98e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;6.31e-15;3!CL:0000223;6.20e-10;58!CL:0000357;5.84e-08;6!CL:0000114;5.84e-08;6 | |||
|ontology_enrichment_disease=DOID:1749!1.46e-11!14 | |ontology_enrichment_disease=DOID:1749!1.46e-11!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.13e-11;1!DOID:3149;1.13e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,8.64e-12,1;DOID:3149,8.64e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.89e-17!72;UBERON:0007196!2.14e-12!14;UBERON:0001558!2.14e-12!14;UBERON:0004815!2.46e-12!3;UBERON:0002031!2.46e-12!3;UBERON:0000065!2.82e-12!53;UBERON:0001949!5.21e-12!3;UBERON:0003729!1.63e-11!5;UBERON:0005178!7.91e-11!34;UBERON:0002224!7.91e-11!34;UBERON:0005181!1.87e-10!35;UBERON:0004119!5.04e-10!169;UBERON:0000925!5.04e-10!169;UBERON:0006595!5.04e-10!169;UBERON:0000166!8.29e-10!21;UBERON:0003102!2.00e-09!95;UBERON:0002185!2.37e-09!4;UBERON:0002419!4.09e-09!2;UBERON:0007771!4.09e-09!2;UBERON:0003297!4.09e-09!2;UBERON:0001821!4.09e-09!2;UBERON:0003487!4.09e-09!2;UBERON:0001820!4.09e-09!2;UBERON:0005089!4.09e-09!2;UBERON:0005088!4.09e-09!2;UBERON:0000165!7.30e-09!28;UBERON:0000930!7.30e-09!28;UBERON:0003126!9.73e-09!7;UBERON:0001005!9.73e-09!7;UBERON:0003343!1.63e-08!4;UBERON:0004785!1.63e-08!4;UBERON:0000161!2.13e-08!35;UBERON:0000915!1.42e-07!52;UBERON:0001444!6.06e-07!48;UBERON:0001003!9.69e-07!14;UBERON:0007376!9.69e-07!14;UBERON:0007383!9.69e-07!14;UBERON:0001007!9.83e-07!155;UBERON:0001555!9.83e-07!155;UBERON:0007026!9.83e-07!155 | |ontology_enrichment_uberon=UBERON:0001004!1.89e-17!72;UBERON:0007196!2.14e-12!14;UBERON:0001558!2.14e-12!14;UBERON:0004815!2.46e-12!3;UBERON:0002031!2.46e-12!3;UBERON:0000065!2.82e-12!53;UBERON:0001949!5.21e-12!3;UBERON:0003729!1.63e-11!5;UBERON:0005178!7.91e-11!34;UBERON:0002224!7.91e-11!34;UBERON:0005181!1.87e-10!35;UBERON:0004119!5.04e-10!169;UBERON:0000925!5.04e-10!169;UBERON:0006595!5.04e-10!169;UBERON:0000166!8.29e-10!21;UBERON:0003102!2.00e-09!95;UBERON:0002185!2.37e-09!4;UBERON:0002419!4.09e-09!2;UBERON:0007771!4.09e-09!2;UBERON:0003297!4.09e-09!2;UBERON:0001821!4.09e-09!2;UBERON:0003487!4.09e-09!2;UBERON:0001820!4.09e-09!2;UBERON:0005089!4.09e-09!2;UBERON:0005088!4.09e-09!2;UBERON:0000165!7.30e-09!28;UBERON:0000930!7.30e-09!28;UBERON:0003126!9.73e-09!7;UBERON:0001005!9.73e-09!7;UBERON:0003343!1.63e-08!4;UBERON:0004785!1.63e-08!4;UBERON:0000161!2.13e-08!35;UBERON:0000915!1.42e-07!52;UBERON:0001444!6.06e-07!48;UBERON:0001003!9.69e-07!14;UBERON:0007376!9.69e-07!14;UBERON:0007383!9.69e-07!14;UBERON:0001007!9.83e-07!155;UBERON:0001555!9.83e-07!155;UBERON:0007026!9.83e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.41e-22;2!UBERON:0007771;1.41e-22;2!UBERON:0003297;1.41e-22;2!UBERON:0001821;1.41e-22;2!UBERON:0003487;1.41e-22;2!UBERON:0001820;1.41e-22;2!UBERON:0004815;6.31e-15;3!UBERON:0002031;6.31e-15;3!UBERON:0001949;6.31e-15;3!UBERON:0010371;5.70e-12;31!UBERON:0000997;1.13e-11;1!UBERON:0005056;1.13e-11;1!UBERON:0004176;1.13e-11;1!UBERON:0001003;1.27e-11;15!UBERON:0007376;1.27e-11;15!UBERON:0007196;2.07e-11;15!UBERON:0001558;2.07e-11;15!UBERON:0000065;3.20e-11;44!UBERON:0002185;2.52e-09;5!UBERON:0004807;7.71e-08;22!UBERON:0003126;6.68e-07;7!UBERON:0000485;6.68e-07;7!UBERON:0003929;6.68e-07;7!UBERON:0001005;6.68e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.66e-22,2;UBERON:0007771,1.66e-22,2;UBERON:0003297,1.66e-22,2;UBERON:0001821,1.66e-22,2;UBERON:0003487,1.66e-22,2;UBERON:0001820,1.66e-22,2;UBERON:0005089,1.66e-22,2;UBERON:0005088,1.66e-22,2;UBERON:0004815,6.10e-15,3;UBERON:0002031,6.10e-15,3;UBERON:0001949,8.08e-15,3;UBERON:0001004,9.80e-13,74;UBERON:0001003,1.27e-11,15;UBERON:0007376,1.27e-11,15;UBERON:0007383,1.27e-11,15;UBERON:0000065,1.72e-11,54;UBERON:0000997,1.81e-11,1;UBERON:0005056,1.81e-11,1;UBERON:0007196,2.19e-11,15;UBERON:0001558,2.19e-11,15;UBERON:0002185,2.47e-09,5;UBERON:0003126,7.19e-07,7;UBERON:0001005,7.19e-07,7 | |||
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| ||
|short_description=p@chr19:47430721..47430732,+ | |short_description=p@chr19:47430721..47430732,+ | ||
}} | }} |
Latest revision as of 15:24, 27 July 2015
Short description: | p@chr19:47430721..47430732, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:47430721..47430732, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 1.66e-22 | 2 |
epidermis gland | 1.66e-22 | 2 |
gland of integumental system | 1.66e-22 | 2 |
sebaceous gland | 1.66e-22 | 2 |
skin sebaceous gland | 1.66e-22 | 2 |
sweat gland | 1.66e-22 | 2 |
sweat gland placode | 1.66e-22 | 2 |
sebaceous gland placode | 1.66e-22 | 2 |
lower respiratory tract epithelium | 6.10e-15 | 3 |
epithelium of bronchus | 6.10e-15 | 3 |
gingival epithelium | 8.08e-15 | 3 |
respiratory system | 9.80e-13 | 74 |
skin epidermis | 1.27e-11 | 15 |
outer epithelium | 1.27e-11 | 15 |
enveloping layer of ectoderm | 1.27e-11 | 15 |
respiratory tract | 1.72e-11 | 54 |
mammalian vulva | 1.81e-11 | 1 |
external female genitalia | 1.81e-11 | 1 |
tracheobronchial tree | 2.19e-11 | 15 |
lower respiratory tract | 2.19e-11 | 15 |
bronchus | 2.47e-09 | 5 |
trachea | 7.19e-07 | 7 |
respiratory airway | 7.19e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 8.64e-12 | 1 |
keratoacanthoma | 8.64e-12 | 1 |