FFCP PHASE1:Hg19::chr19:49553696..49553725,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:49553696..49553725,- | |||
|coexpression_cluster_id=C367 | |coexpression_cluster_id=C367 | ||
|description=CAGE_peak_at_chr19:49553696..49553725,- | |description=CAGE_peak_at_chr19:49553696..49553725,- | ||
|id=chr19:49553696..49553725,- | |id=chr19:49553696..49553725,- | ||
|ontology_enrichment_celltype=CL:0002620!5.04e-15!23;CL:0000054!5.78e-08!2;CL:0000137!5.78e-08!2;CL:0000092!5.78e-08!2;CL:0000128!4.58e-07!7;CL:0000126!4.58e-07!7;CL:0000127!4.58e-07!7;CL:0002453!4.58e-07!7;CL:0000062!4.98e-07!11;CL:0000375!4.98e-07!11;CL:0000335!4.98e-07!11 | |ontology_enrichment_celltype=CL:0002620!5.04e-15!23;CL:0000054!5.78e-08!2;CL:0000137!5.78e-08!2;CL:0000092!5.78e-08!2;CL:0000128!4.58e-07!7;CL:0000126!4.58e-07!7;CL:0000127!4.58e-07!7;CL:0002453!4.58e-07!7;CL:0000062!4.98e-07!11;CL:0000375!4.98e-07!11;CL:0000335!4.98e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:1001319;4.53e-12;1!CL:1000600;4.53e-12;1!CL:0002620;2.38e-11;23 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,4.53e-12,1;CL:1000600,4.53e-12,1;CL:0002620,2.35e-11,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:200!5.78e-08!2;DOID:4305!5.78e-08!2 | |ontology_enrichment_disease=DOID:200!5.78e-08!2;DOID:4305!5.78e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:17;1.72e-09;5!DOID:450;1.72e-09;5!DOID:66;1.72e-09;5!DOID:423;1.72e-09;5!DOID:0080000;1.72e-09;5!DOID:11722;1.72e-09;5!DOID:4929;8.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.69e-09,5;DOID:450,1.69e-09,5;DOID:66,1.69e-09,5;DOID:423,1.69e-09,5;DOID:0080000,1.69e-09,5;DOID:11722,1.69e-09,5;DOID:4929,8.93e-07,2;DOID:7,9.96e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.62e-11!40;UBERON:0002199!1.98e-09!45;UBERON:0002416!1.98e-09!45;UBERON:0003102!8.35e-07!95 | |ontology_enrichment_uberon=UBERON:0002097!5.62e-11!40;UBERON:0002199!1.98e-09!45;UBERON:0002416!1.98e-09!45;UBERON:0003102!8.35e-07!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002294;3.63e-14;7!UBERON:0001173;3.63e-14;7!UBERON:0004913;2.63e-12;1!UBERON:0003703;2.63e-12;1!UBERON:0001174;2.63e-12;1!UBERON:0004914;2.63e-12;1!UBERON:0004645;4.53e-12;1!UBERON:0001256;4.53e-12;1!UBERON:0001259;4.53e-12;1!UBERON:0002394;1.10e-11;4!UBERON:0003928;1.10e-11;4!UBERON:0002097;3.98e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.63e-12,1;UBERON:0003703,2.63e-12,1;UBERON:0001174,2.63e-12,1;UBERON:0004914,2.63e-12,1;UBERON:0004645,4.53e-12,1;UBERON:0001256,4.53e-12,1;UBERON:0001259,4.53e-12,1;UBERON:0002294,3.43e-11,9;UBERON:0001173,3.43e-11,9;UBERON:0004912,3.43e-11,9;UBERON:0002097,8.36e-09,41;UBERON:0002394,4.19e-08,6;UBERON:0003928,4.19e-08,6;UBERON:0002199,8.41e-08,46;UBERON:0002416,8.41e-08,46;UBERON:0003102,1.98e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15267562826634,0,0,5.10154863343484,0.103052529238439,0.257640540045629,0.37223371266318,1.0126579934476,0.194874010322397,0.757301322732344,0,0,4.61512470271599,1.71278566986988,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,2.01578553838631,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,2.51631383212515,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0,0,0,0.137041924646751,0.794858446811959,0,0,1.44285876452761,0,0.19980960958213,0,0,0,0,0,0,0.407712618220842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04465626142506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0.192619830407303,0,0,1.13352962756136,0.694567422971502,0,1.4327107286519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23887471053385,0,0,0,3.05105676373734,0,0,0,2.62216589314576,0,0,0,37.8511580715636,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2886230236389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17472747582801,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15267562826634,0,0,5.10154863343484,0.103052529238439,0.257640540045629,0.37223371266318,1.0126579934476,0.194874010322397,0.757301322732344,0,0,4.61512470271599,1.71278566986988,0.169560592310488,0,0.272746120590835,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,2.01578553838631,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.183138929636687,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,2.51631383212515,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391969589657511,0,0,0,0,0,0,0,0,0,0.137041924646751,0.794858446811959,0,0,1.44285876452761,0,0.19980960958213,0,0,0,0,0,0,0.407712618220842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04465626142506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0.192619830407303,0,0,1.13352962756136,0.694567422971502,0,1.4327107286519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23887471053385,0,0,0,3.05105676373734,0,0,0,2.62216589314576,0,0,0,37.8511580715636,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2886230236389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.17472747582801,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:49553696..49553725,- | |short_description=p@chr19:49553696..49553725,- | ||
}} | }} |
Latest revision as of 15:59, 27 July 2015
Short description: | p@chr19:49553696..49553725, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49553696..49553725, - |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 4.53e-12 | 1 |
lower urinary tract cell | 4.53e-12 | 1 |
skin fibroblast | 2.35e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.63e-12 | 1 |
extrahepatic bile duct | 2.63e-12 | 1 |
common bile duct | 2.63e-12 | 1 |
duodenal papilla | 2.63e-12 | 1 |
urinary bladder urothelium | 4.53e-12 | 1 |
wall of urinary bladder | 4.53e-12 | 1 |
mucosa of urinary bladder | 4.53e-12 | 1 |
biliary system | 3.43e-11 | 9 |
biliary tree | 3.43e-11 | 9 |
biliary bud | 3.43e-11 | 9 |
skin of body | 8.36e-09 | 41 |
bile duct | 4.19e-08 | 6 |
digestive system duct | 4.19e-08 | 6 |
integument | 8.41e-08 | 46 |
integumental system | 8.41e-08 | 46 |
surface structure | 1.98e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.69e-09 | 5 |
myotonic disease | 1.69e-09 | 5 |
muscle tissue disease | 1.69e-09 | 5 |
myopathy | 1.69e-09 | 5 |
muscular disease | 1.69e-09 | 5 |
myotonic dystrophy | 1.69e-09 | 5 |
tubular adenocarcinoma | 8.93e-07 | 2 |
disease of anatomical entity | 9.96e-07 | 39 |