FFCP PHASE1:Hg19::chr1:115212843..115212862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:115212843..115212862,+ | |||
|description=CAGE_peak_at_chr1:115212843..115212862,+ | |description=CAGE_peak_at_chr1:115212843..115212862,+ | ||
|id=chr1:115212843..115212862,+ | |id=chr1:115212843..115212862,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.83e-11!254;CL:0002076!7.21e-10!43;CL:0000223!7.30e-09!59 | |ontology_enrichment_celltype=CL:0000066!3.83e-11!254;CL:0002076!7.21e-10!43;CL:0000223!7.30e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.58e-11;5!CL:0002363;6.35e-08;2!CL:0000163;8.58e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.76e-11,5;CL:0002028,1.76e-11,5;CL:0002363,8.60e-08,2;CL:0000008,8.60e-08,2;CL:0000163,9.10e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000008;6.35e-08;2 | |||
|ontology_enrichment_disease=DOID:305!4.78e-19!106;DOID:0050687!3.01e-13!143;DOID:1749!2.92e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;1.50e-14;1!DOID:3149;1.50e-14;1!DOID:1749;3.64e-09;14!DOID:3451;6.35e-08;2!DOID:4159;6.35e-08;2!DOID:0060122;6.35e-08;2!DOID:4929;6.35e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.07e-14,1;DOID:3149,1.07e-14,1;DOID:1749,3.64e-09,14;DOID:3451,5.37e-08,2;DOID:4159,5.37e-08,2;DOID:0060122,5.37e-08,2;DOID:4929,9.19e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!7.57e-10!72 | |ontology_enrichment_uberon=UBERON:0001004!7.57e-10!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;6.21e-15;1!UBERON:0005056;6.21e-15;1!UBERON:0004176;6.21e-15;1!UBERON:0004913;1.50e-14;1!UBERON:0003703;1.50e-14;1!UBERON:0001174;1.50e-14;1!UBERON:0004914;1.50e-14;1!UBERON:0003566;6.35e-08;2!UBERON:0001777;6.35e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,6.22e-15,1;UBERON:0005056,6.22e-15,1;UBERON:0004913,3.15e-14,1;UBERON:0003703,3.15e-14,1;UBERON:0001174,3.15e-14,1;UBERON:0004914,3.15e-14,1;UBERON:0003566,8.60e-08,2;UBERON:0001777,8.60e-08,2;UBERON:0000076,1.23e-07,8 | |||
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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0.401088894940283,0,0,0,0.257575567634187,0,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0.521482918420201,0.65156653411535,0,1.10483290796269,0.316462387440884,0,0,0,0.112328631146495,0,0,0.570025487482497,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0,0.32592226663359,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0,0,0,0,0.168776332241266,0,0.504867548488229,0,0,0,0,0,0.773043412653187,0.545492241181669,0.286804595389004,0.365921118388786,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0.370353780634118,0,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0.93733833986777,0,0,1.70161193135412,0.290633938513962,0,0.492663237895943,0,0.829312462163088,1.15295962733569,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0.165018999841176,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,1.65896526242959,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,0,4.60741053148848,0,0,0.111308705022906,0.16480387422676,0.63337622438398,0,0,0,0.102268682502155,0,0,0.179736702294654,0.716084698702437,0,0,0,0,0,0,0,0,0,0.724999575434793,0.1137934482855,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0.21787692703798,0.975966209950223,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0.284609546029793,0,0,3.62571870433197,0.870592065804026,0,0,0.677294319023596,0.730893170861856,0.328461828212837,0.290967049465258,0,0,0,0,0,0.586654148204409,0.0801588202515337,0.213452994739353,0.19980960958213,0,0.114536596165916,0,0.432164393964449,0.124252535565433,1.17847017308398,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0,0,6.98975697164723,0,0,0,0.196854963029498,0,0,0,0.964518890790115,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,1.34173875039706,0,0.0524545881349981,0,0.35857467866569,1.53532157855556,0,0.662091970365432,0.25426853765475,0,0,0,1.19730191562487,0,0,0,0.293104467356165,0,0,0,0.171086837884329,0,0,0,0,0,0.395223263795889,0,0.638341257770182,0.544017803369474,0.2506898940227,0.306345576763462,0.983617892129413,0.314108192500469,0,0,0,0,0.221858103073705,0,0.276697269872462,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0.151230923763239,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.322231671127465,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0,0,0,0.633936370075881,0,0,0,0,0.736423801007363,0.839277046316667,0,0,0,0.314531883711793,0,0,0,0,0.558644917973244,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.196295437002051,0.707818340086442,1.10057159113007,0.808679663052368,0,0,0,0,0.20170506870352,0,0,0.327543835020193,1.03499260351932,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0,0.230467975111559,0,0,0,0.118193840883968,0.111231401892069,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0.62164849248911,0.17071847709395,0.691259661814092,0,0,0,0,0.4582137370881,0.31020638566432,0,0,0,0.365753774946808,0,0.718639647993729,0,0,0,0,0,0.11294608203896,0.109940516745429,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0,0.169927114687817,0,0,0,0,0.705789743431384,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.380095503034311,0.101988829741982,0,0.0918948995348449,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0,0,0,0.0620747142958579,0.224263725161227,0,0,0.217716747896961,0,0.202056159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| ||
|short_description=p@chr1:115212843..115212862,+ | |short_description=p@chr1:115212843..115212862,+ | ||
}} | }} |
Latest revision as of 19:59, 27 July 2015
Short description: | p@chr1:115212843..115212862, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:115212843..115212862, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.76e-11 | 5 |
basophil mast progenitor cell | 1.76e-11 | 5 |
keratocyte | 8.60e-08 | 2 |
migratory cranial neural crest cell | 8.60e-08 | 2 |
endocrine cell | 9.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 6.22e-15 | 1 |
external female genitalia | 6.22e-15 | 1 |
hepatopancreatic ampulla | 3.15e-14 | 1 |
extrahepatic bile duct | 3.15e-14 | 1 |
common bile duct | 3.15e-14 | 1 |
duodenal papilla | 3.15e-14 | 1 |
head connective tissue | 8.60e-08 | 2 |
substantia propria of cornea | 8.60e-08 | 2 |
external ectoderm | 1.23e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.07e-14 | 1 |
keratoacanthoma | 1.07e-14 | 1 |
squamous cell carcinoma | 3.64e-09 | 14 |
skin carcinoma | 5.37e-08 | 2 |
skin cancer | 5.37e-08 | 2 |
integumentary system cancer | 5.37e-08 | 2 |
tubular adenocarcinoma | 9.19e-08 | 2 |