FFCP PHASE1:Hg19::chr1:14027398..14027404,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:14027398..14027404,- | |||
|description=CAGE_peak_at_chr1:14027398..14027404,- | |description=CAGE_peak_at_chr1:14027398..14027404,- | ||
|id=chr1:14027398..14027404,- | |id=chr1:14027398..14027404,- | ||
|ontology_enrichment_celltype=CL:0000738!5.29e-27!140;CL:0000988!2.60e-25!182;CL:0000037!5.03e-24!172;CL:0000566!5.03e-24!172;CL:0000542!4.49e-22!53;CL:0000051!4.49e-22!53;CL:0000838!2.89e-21!52;CL:0002087!9.64e-20!119;CL:0002032!1.51e-19!165;CL:0000837!1.51e-19!165;CL:0002031!1.93e-18!124;CL:0000945!7.56e-14!24;CL:0000826!7.56e-14!24;CL:0000134!6.59e-11!358;CL:0002320!1.10e-10!365;CL:0000219!1.16e-10!390;CL:0000451!4.84e-10!10;CL:0000080!7.02e-09!6;CL:0000034!4.41e-08!444;CL:0000453!2.21e-07!5;CL:0000990!2.96e-07!8;CL:0000048!4.23e-07!430;CL:0000723!4.42e-07!436 | |ontology_enrichment_celltype=CL:0000738!5.29e-27!140;CL:0000988!2.60e-25!182;CL:0000037!5.03e-24!172;CL:0000566!5.03e-24!172;CL:0000542!4.49e-22!53;CL:0000051!4.49e-22!53;CL:0000838!2.89e-21!52;CL:0002087!9.64e-20!119;CL:0002032!1.51e-19!165;CL:0000837!1.51e-19!165;CL:0002031!1.93e-18!124;CL:0000945!7.56e-14!24;CL:0000826!7.56e-14!24;CL:0000134!6.59e-11!358;CL:0002320!1.10e-10!365;CL:0000219!1.16e-10!390;CL:0000451!4.84e-10!10;CL:0000080!7.02e-09!6;CL:0000034!4.41e-08!444;CL:0000453!2.21e-07!5;CL:0000990!2.96e-07!8;CL:0000048!4.23e-07!430;CL:0000723!4.42e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000784;7.38e-22;3!CL:0000945;7.78e-17;24!CL:0000451;1.23e-15;10!CL:0000226;9.79e-10;3!CL:0000767;9.79e-10;3!CL:0000842;9.79e-10;3!CL:0000946;1.97e-08;1!CL:0000786;1.97e-08;1!CL:0000990;2.15e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.05e-24,136;CL:0000784,7.42e-22,3;CL:0000988,4.43e-19,177;CL:0000037,1.88e-18,168;CL:0000945,5.35e-17,24;CL:0000826,5.35e-17,24;CL:0000451,1.13e-15,10;CL:0000838,1.37e-13,52;CL:0002087,2.62e-13,115;CL:0000542,2.70e-13,53;CL:0000051,2.70e-13,53;CL:0002031,1.09e-12,120;CL:0002032,1.25e-12,161;CL:0000837,1.25e-12,161;CL:0000226,9.81e-10,3;CL:0000767,9.81e-10,3;CL:0000842,9.81e-10,3;CL:0000946,1.91e-08,1;CL:0000786,1.91e-08,1;CL:0000980,1.91e-08,1;CL:0000134,5.33e-08,354;CL:0002320,9.49e-08,361;CL:0000990,2.04e-07,8;CL:0000219,7.25e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!5.38e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;1.77e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.77e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.72e-10!375 | |ontology_enrichment_uberon=UBERON:0002384!2.72e-10!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.08e-07,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,1.39571002064908,1.57421562627358,1.57345710739562,1.15148819429164,0.619264493264304,0,0,0.739508020333575,0.542270404062111,1.9903692548239,0.880801318004542,0.553995408531877,1.80490002723128,3.25516306073778,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0,0,1.35426486594342,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0.316462387440884,0,0.637812899895131,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0.569212969109448,1.17447437874188,0.764546456250458,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0,0,1.24930726552346,0.236777252044017,0,0.201606743224732,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0.174129737299267,0,4.29283123749616,9.15191857248205,3.71457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,1.00973509697646,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301586917234893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72943944100354,0.37872730027914,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.646882724578552,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.50999940573032,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17781969722645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.284567373393656,0,0.199579371432817,0,0,0,0.280797178113459,0,0.47003968731907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58478091468246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0.432777279484182,0,0,0,2.6686901581256,0.617819694732514,0.104421949505455,0,0,0,0.547364367646998,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,6.94321322939433,0,0,0,0,0,0.2249738915515,2.32140586367385,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0.197611631897944,0.365377795142688,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0.701139929541673,0.554805861502613,0.189403005275089,0,0,0,0,0.466311601748341,0.295710299979268,0,0,0.465788870628778,0,0,1.04349012362347,0,0,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0.132864840313363,1.4720885483026,0,0,0,0.39997479170986,0.320075189082423,0,0,0,0.139879507719444,0,0,0,0.471797825567689,0,0.169732529954025,0.425149840203366,0.619678821295011,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0.235939446695481,0,0,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37889152711961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0.0644578879735772,0.699588091474503,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0.252332849670158,1.09265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 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| ||
|short_description=p@chr1:14027398..14027404,- | |short_description=p@chr1:14027398..14027404,- | ||
}} | }} |
Latest revision as of 20:37, 27 July 2015
Short description: | p@chr1:14027398..14027404, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:14027398..14027404, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.05e-24 | 136 |
plasmacytoid dendritic cell | 7.42e-22 | 3 |
hematopoietic cell | 4.43e-19 | 177 |
hematopoietic stem cell | 1.88e-18 | 168 |
lymphocyte of B lineage | 5.35e-17 | 24 |
pro-B cell | 5.35e-17 | 24 |
dendritic cell | 1.13e-15 | 10 |
lymphoid lineage restricted progenitor cell | 1.37e-13 | 52 |
nongranular leukocyte | 2.62e-13 | 115 |
lymphocyte | 2.70e-13 | 53 |
common lymphoid progenitor | 2.70e-13 | 53 |
hematopoietic lineage restricted progenitor cell | 1.09e-12 | 120 |
hematopoietic oligopotent progenitor cell | 1.25e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.25e-12 | 161 |
single nucleate cell | 9.81e-10 | 3 |
basophil | 9.81e-10 | 3 |
mononuclear cell | 9.81e-10 | 3 |
antibody secreting cell | 1.91e-08 | 1 |
plasma cell | 1.91e-08 | 1 |
plasmablast | 1.91e-08 | 1 |
mesenchymal cell | 5.33e-08 | 354 |
connective tissue cell | 9.49e-08 | 361 |
conventional dendritic cell | 2.04e-07 | 8 |
motile cell | 7.25e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.08e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.77e-08 | 1 |