FFCP PHASE1:Hg19::chr1:152081127..152081142,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:152081127..152081142,- | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_at_chr1:152081127..152081142,- | |description=CAGE_peak_at_chr1:152081127..152081142,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!4.75e-10!3;CL:0000990!5.66e-08!8 | |ontology_enrichment_celltype=CL:0002541!4.75e-10!3;CL:0000990!5.66e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.37e-10;2!CL:0001016;2.37e-10;2!CL:0002541;2.55e-07;3!CL:0002577;2.55e-07;3 | |ontology_enrichment_celltype_v019=CL:0001014;2.37e-10;2!CL:0001016;2.37e-10;2!CL:0002541;2.55e-07;3!CL:0002577;2.55e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.07e-10,2;CL:0001016,2.07e-10,2;CL:0002577,2.05e-07,3;CL:0002541,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.93e-20;1 | |ontology_enrichment_development_v019=UBERON:0003124;8.93e-20;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3347;2.47e-19;1 | |ontology_enrichment_disease_v019=DOID:3347;2.47e-19;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3347,2.25e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0003124!2.11e-11!7;UBERON:0000476!4.75e-10!3;UBERON:0000920!4.75e-10!3;UBERON:0005631!1.42e-07!14;UBERON:0000158!1.42e-07!14 | |ontology_enrichment_uberon=UBERON:0003124!2.11e-11!7;UBERON:0000476!4.75e-10!3;UBERON:0000920!4.75e-10!3;UBERON:0005631!1.42e-07!14;UBERON:0000158!1.42e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0001987;3.41e-19;4!UBERON:0000478;1.97e-07;24!UBERON:0003124;2.55e-07;3!UBERON:0000920;2.55e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001987;3.41e-19;4!UBERON:0000478;1.97e-07;24!UBERON:0003124;2.55e-07;3!UBERON:0000920;2.55e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,6.12e-24,7;UBERON:0001987,2.48e-19,4;UBERON:0004340,2.48e-19,4;UBERON:0005631,2.53e-12,14;UBERON:0000158,2.53e-12,14;UBERON:0000478,1.97e-07,24;UBERON:0000920,3.16e-07,3 | |||
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| ||
|short_description=p@chr1:152081127..152081142,- | |short_description=p@chr1:152081127..152081142,- | ||
}} | }} |
Latest revision as of 21:32, 27 July 2015
Short description: | p@chr1:152081127..152081142, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:152081127..152081142, - |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.07e-10 | 2 |
immature CD1a-positive Langerhans cell | 2.07e-10 | 2 |
placental epithelial cell | 2.05e-07 | 3 |
chorionic membrane mesenchymal stem cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chorion | 6.12e-24 | 7 |
placenta | 2.48e-19 | 4 |
allantois | 2.48e-19 | 4 |
extraembryonic membrane | 2.53e-12 | 14 |
membranous layer | 2.53e-12 | 14 |
extraembryonic structure | 1.97e-07 | 24 |
egg chorion | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.25e-19 | 1 |