FFCP PHASE1:Hg19::chr1:15545407..15545411,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:15545407..15545411,+
|short_description=p@chr1:15545407..15545411,+
|description=CAGE_peak_at_chr1:15545407..15545411,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:15545407..15545411,+ | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr1:15545407..15545411,+ | |||
|id=chr1:15545407..15545411,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.11e-35!42;CL:0000860!3.68e-32!45;CL:0000766!1.86e-25!76;CL:0002009!9.94e-23!65;CL:0000557!1.49e-22!71;CL:0002194!3.94e-21!63;CL:0000576!3.94e-21!63;CL:0000040!3.94e-21!63;CL:0000559!3.94e-21!63;CL:0000839!1.27e-20!70;CL:0000738!2.43e-19!140;CL:0000763!1.05e-18!112;CL:0000049!1.05e-18!112;CL:0002031!1.82e-17!124;CL:0002032!1.17e-16!165;CL:0000837!1.17e-16!165;CL:0000037!1.09e-15!172;CL:0000566!1.09e-15!172;CL:0002087!2.37e-15!119;CL:0000988!1.97e-14!182;CL:0000767!3.34e-14!3;CL:0000623!6.54e-13!3;CL:0000825!6.54e-13!3;CL:0002393!1.56e-07!9;CL:0002397!1.56e-07!9;CL:0000134!9.18e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000767;4.71e-75;3!CL:0000094;9.30e-29;8!CL:0000081;3.79e-21;11!CL:0000766;4.59e-11;69!CL:0002541;1.53e-09;3!CL:0000860;1.11e-07;33!CL:0002057;1.11e-07;33!CL:0000576;4.61e-07;48!CL:0000763;5.09e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,4.72e-75,3;CL:0000094,9.31e-29,8;CL:0000081,3.79e-21,11;CL:0000766,1.11e-16,72;CL:0000763,3.49e-11,108;CL:0000049,3.49e-11,108;CL:0000860,7.57e-10,42;CL:0002057,7.57e-10,42;CL:0002541,1.81e-09,3;CL:0000738,6.88e-09,136;CL:0000473,1.15e-08,48;CL:0000234,1.15e-08,48;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0002194,5.27e-07,59;CL:0000576,5.27e-07,59;CL:0000040,5.27e-07,59;CL:0000559,5.27e-07,59;CL:0000988,8.17e-07,177;CL:0002009,8.65e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;2.22e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.92e-19!80;UBERON:0001474!9.93e-18!86;UBERON:0002405!9.13e-15!115;UBERON:0004765!2.45e-14!101;UBERON:0001434!2.45e-14!101;UBERON:0002390!3.79e-14!102;UBERON:0003061!3.79e-14!102;UBERON:0002193!7.97e-14!112;UBERON:0002204!9.92e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.53e-09;3!UBERON:0000920;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.81e-09,3 | |||
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| ||
|short_description=p@chr1:15545407..15545411,+ | |||
}} | }} |
Latest revision as of 22:18, 27 July 2015
Short description: | p@chr1:15545407..15545411, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:15545407..15545411, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 4.72e-75 | 3 |
granulocyte | 9.31e-29 | 8 |
blood cell | 3.79e-21 | 11 |
myeloid leukocyte | 1.11e-16 | 72 |
myeloid cell | 3.49e-11 | 108 |
common myeloid progenitor | 3.49e-11 | 108 |
classical monocyte | 7.57e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.57e-10 | 42 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
leukocyte | 6.88e-09 | 136 |
defensive cell | 1.15e-08 | 48 |
phagocyte | 1.15e-08 | 48 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic stem cell | 3.48e-07 | 168 |
monopoietic cell | 5.27e-07 | 59 |
monocyte | 5.27e-07 | 59 |
monoblast | 5.27e-07 | 59 |
promonocyte | 5.27e-07 | 59 |
hematopoietic cell | 8.17e-07 | 177 |
macrophage dendritic cell progenitor | 8.65e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.81e-09 | 3 |