FFCP PHASE1:Hg19::chr1:171076893..171076933,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:171076893..171076933,+ | |||
|description=CAGE_peak_at_chr1:171076893..171076933,+ | |||
|id=chr1:171076893..171076933,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.35e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0002564;2.76e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,2.78e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.58e-51!115;UBERON:0002616!9.21e-24!59;UBERON:0000955!2.71e-21!69;UBERON:0006238!2.71e-21!69;UBERON:0001017!8.48e-20!82;UBERON:0001049!1.00e-19!57;UBERON:0005068!1.00e-19!57;UBERON:0006241!1.00e-19!57;UBERON:0007135!1.00e-19!57;UBERON:0000153!2.04e-19!129;UBERON:0007811!2.04e-19!129;UBERON:0005743!2.09e-19!86;UBERON:0000033!9.02e-19!123;UBERON:0000073!4.09e-17!94;UBERON:0001016!4.09e-17!94;UBERON:0003075!1.07e-16!86;UBERON:0007284!1.07e-16!86;UBERON:0003080!5.03e-16!42;UBERON:0002346!2.63e-15!90;UBERON:0002780!3.37e-15!41;UBERON:0001890!3.37e-15!41;UBERON:0006240!3.37e-15!41;UBERON:0000475!2.23e-14!365;UBERON:0004121!4.98e-13!169;UBERON:0000481!7.14e-13!347;UBERON:0000924!2.71e-12!173;UBERON:0006601!2.71e-12!173;UBERON:0000477!2.52e-11!286;UBERON:0003056!5.57e-11!61;UBERON:0002020!2.22e-10!34;UBERON:0003528!2.22e-10!34;UBERON:0001893!4.51e-10!34;UBERON:0002791!1.51e-09!33;UBERON:0001869!8.48e-09!32;UBERON:0002298!3.13e-08!8;UBERON:0000062!4.36e-08!511;UBERON:0001894!9.05e-08!7;UBERON:0006222!9.05e-08!7;UBERON:0000483!9.64e-08!309;UBERON:0004111!1.17e-07!241;UBERON:0000119!1.84e-07!312;UBERON:0005284!2.76e-07!5;UBERON:0002619!3.46e-07!22;UBERON:0001950!5.29e-07!20;UBERON:0000468!5.80e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.61e-14;5!UBERON:0002216;2.61e-14;5!UBERON:0011134;2.61e-14;5!UBERON:0002209;2.61e-14;5!UBERON:0002213;2.61e-14;5!UBERON:0007844;2.61e-14;5!UBERON:0011138;2.61e-14;5!UBERON:0001130;2.61e-14;5!UBERON:0001066;2.61e-14;5!UBERON:0001468;2.61e-14;5!UBERON:0002242;2.76e-09;3!UBERON:0005284;4.49e-09;5!UBERON:0004905;9.86e-09;8!UBERON:0000982;9.86e-09;8!UBERON:0004770;9.86e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.23e-15,114;UBERON:0011135,2.61e-14,5;UBERON:0002216,2.61e-14,5;UBERON:0011134,2.61e-14,5;UBERON:0002209,2.61e-14,5;UBERON:0002213,2.61e-14,5;UBERON:0005856,2.61e-14,5;UBERON:0005866,2.61e-14,5;UBERON:0005863,2.61e-14,5;UBERON:0007844,2.61e-14,5;UBERON:0011138,2.61e-14,5;UBERON:0001130,2.61e-14,5;UBERON:0001066,2.61e-14,5;UBERON:0001468,2.61e-14,5;UBERON:0002242,2.78e-09,3;UBERON:0003068,2.78e-09,3;UBERON:0002328,2.78e-09,3;UBERON:0004880,2.78e-09,3;UBERON:0005284,4.43e-09,5;UBERON:0004905,9.85e-09,8;UBERON:0000982,9.85e-09,8;UBERON:0004770,9.85e-09,8;UBERON:0011216,4.10e-08,223 | |||
|phase1_expression=0.726713517082227,0.642301571672949,0.140954404095971,1.0007329835313,0.446961094427288,2.61701557230111,0,0.631719873426831,0.522371256399677,0,0,0,0,15.5945604729659,14.2500871563004,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,4.01070328508712,0.434539556882471,0,0.486634870302636,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.942974704487816,0,19.6764655938411,5.76175924479999,0,0,0,0.747243402759005,0,0.161872944368132,0,2.85815839756851,0,3.30642499762449,1.18800285728205,0,1.82032272387605,0,0.168336113954066,0,0.554128230968366,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.80823028409406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10804720835177,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,1.42977993658148,0,0,0,3.55391948742546,0,0,0,0,0,0,0,0,5.7430967917057,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4274899463467,19.0064798002677,9.76554085319048,2.28767947683888,0.178428988797162,0.315404830067869,0.468565659970853,1.50473049863859,2.27407504055985,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.17065003664728,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0.275673144969061,1.93356440762893,1.0151168573996,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34942532423701,5.69482964493707,0.762520775695299,0.511795582622668,3.42351190427136,0,0,1.61885211824983,0,0.117812402345686,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,2.89387767133344,15.0855792970726,0,0,0,0,0,0,0,0.844430541190656,0,0,2.0996083214699,0,0,0,8.84951727301724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0.398495976502139,1.10513566212459,0,0,0,0,0,0,0,1.28236427328014,0,2.22273980289274,0.969332746095218,0.556608588971108,0,0,0,1.44999915086959,0,0,0,0,0,0,0,1.32656082487949,0,0.331737779793674,0,1.53569778007781,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50377859655677,0,0,0,0,0.337005664903385,0,0.702793337176017,0,0,0,0,0,0.30607276163049,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75246180793255,0,3.16373037092745,0,0,0.759729551470544,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0.713987523454252,0,0.600420288709789,1.77976992559591,0,0,0,1.11712960508902,0.229160424011684,0.717873024576814,0.199679000498991,0.858452096273142,2.23171457441873,1.20930250476107,0,0,0,0,0,0,0,0,0.953423842781029,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0.104909176269996,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,1.02586563574658,0,0.517131825446202,1.85125642439766,0,0,13.989151046368,25.4670974261459,7.04206394090232,0.992332043623902,0,0,0,2.1760712134779,1.2534494701135,3.36980134439808,1.31149052283922,0.157054096250234,0,0.122026264901963,0.500763722825999,0.573409195690071,0.665574309221114,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,2.51567901752575,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,1.27707087245721,0.205116364240755,0,0.414943514785307,0.645902582527404,1.42769420259154,0,0,0,0,0,0,0,0.676892955143315,0,0.781514011233092,0,0,0.147856086217045,0.337687923091973,0,0.620060389503552,0.443910671357348,0,2.19303106742873,0.992422356778588,0,0,1.07140367175657,1.68141861109412,0.606965604236632,4.78090601837725,0,0,0.342976018874837,0.543757863814654,0.197318320688547,0,0,1.41287567130925,0,0,0,0,0,6.07550625501579,0,0,0,0,0,0.6828739083758,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,0,0,0,0,0.33883824611688,0,0,0.154348316215889,0,0,1.22574160876953,0,0.392616934229891,0.594092800654172,0,0,0.0939839179798536,0,0,0,0,0,0.730336388246517,1.37618785021362,1.72007499781742,0,0.475940431336403,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0.454672189309436,0,0.829169439458779,0.930896962757057,1.70587185520785,0,0.0645889098360061,0.372448285775147,0,2.3549448562921,0,0.870866991587845,0,1.0776328482334,2.29511057256564,1.99596213927608,0,0,0,0,2.34640942403454,0.244482888365733,0,2.66302709674205,1.20764276154616,0 | |||
|short_description=p@chr1:171076893..171076933,+ | |||
}} |
Latest revision as of 00:17, 28 July 2015
Short description: | p@chr1:171076893..171076933, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:171076893..171076933, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 2.78e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.23e-15 | 114 |
intervertebral cartilage | 2.61e-14 | 5 |
symphysis | 2.61e-14 | 5 |
nonsynovial joint | 2.61e-14 | 5 |
fibrous joint | 2.61e-14 | 5 |
cartilaginous joint | 2.61e-14 | 5 |
developing mesenchymal condensation | 2.61e-14 | 5 |
pre-cartilage condensation | 2.61e-14 | 5 |
cartilaginous condensation | 2.61e-14 | 5 |
cartilage element | 2.61e-14 | 5 |
post-cranial axial skeletal system | 2.61e-14 | 5 |
vertebral column | 2.61e-14 | 5 |
intervertebral disk | 2.61e-14 | 5 |
intervertebral joint | 2.61e-14 | 5 |
nucleus pulposus | 2.78e-09 | 3 |
axial mesoderm | 2.78e-09 | 3 |
notochord | 2.78e-09 | 3 |
chordamesoderm | 2.78e-09 | 3 |
brain vasculature | 4.43e-09 | 5 |
articulation | 9.85e-09 | 8 |
skeletal joint | 9.85e-09 | 8 |
articular system | 9.85e-09 | 8 |
organ system subdivision | 4.10e-08 | 223 |