FFCP PHASE1:Hg19::chr1:194327155..194327162,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:194327155..194327162,-
|short_description=p@chr1:194327155..194327162,-
|description=CAGE_peak_at_chr1:194327155..194327162,-
|association_with_transcript=...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:194327155..194327162,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_at_chr1:194327155..194327162,- | |||
|id=chr1:194327155..194327162,- | |||
|ontology_enrichment_celltype=CL:0000039!2.33e-22!7;CL:0000586!2.33e-22!7;CL:0002541!2.53e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.82e-13;3!CL:0000039;4.77e-13;7!CL:0000586;4.77e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.65e-13,3;CL:0000039,4.97e-13,7;CL:0000586,4.97e-13,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.41e-09;10!UBERON:0005564;3.41e-09;10 | |||
|ontology_enrichment_disease=DOID:1036!6.53e-08!8;DOID:0060085!9.44e-08!1;DOID:3165!9.44e-08!1;DOID:0060121!9.44e-08!1;DOID:2438!9.44e-08!1;DOID:4418!9.44e-08!1;DOID:162!1.47e-07!235;DOID:3112!2.31e-07!1;DOID:14566!2.57e-07!239;DOID:3095!5.64e-07!22;DOID:2994!5.64e-07!22;DOID:0050687!6.98e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.80e-11;8!DOID:0060085;8.62e-11;1!DOID:3165;8.62e-11;1!DOID:0060121;8.62e-11;1!DOID:2438;8.62e-11;1!DOID:4418;8.62e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.80e-11,8;DOID:0060085,8.22e-11,1;DOID:3165,8.22e-11,1;DOID:0060121,8.22e-11,1;DOID:2438,8.22e-11,1;DOID:4418,8.22e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!6.26e-13!8;UBERON:0003135!1.94e-09!11;UBERON:0000476!2.53e-09!3;UBERON:0000920!2.53e-09!3;UBERON:0003124!1.45e-08!7;UBERON:0001282!5.22e-08!1;UBERON:0009842!5.22e-08!1;UBERON:0003704!5.22e-08!1;UBERON:0001171!5.22e-08!1;UBERON:0001172!5.22e-08!1;UBERON:0005631!2.94e-07!14;UBERON:0000158!2.94e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.82e-13;3!UBERON:0000920;2.82e-13;3!UBERON:0000473;2.31e-11;8!UBERON:0001282;3.40e-11;1!UBERON:0009842;3.40e-11;1!UBERON:0003704;3.40e-11;1!UBERON:0001171;3.40e-11;1!UBERON:0001172;3.40e-11;1!UBERON:0003135;2.11e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.65e-13,3;UBERON:0000473,2.23e-11,8;UBERON:0001282,3.41e-11,1;UBERON:0009842,3.41e-11,1;UBERON:0003704,3.41e-11,1;UBERON:0001171,3.41e-11,1;UBERON:0001172,3.41e-11,1;UBERON:0003135,2.05e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0466488552223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89768643453339,0,0,0,0,0,0,0,1.78309414843965,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.17834951836108,2.07507513949254,0.0897576444097721,5.64966333994442,1.91400695839152,0,1.06606955203727,0,0,0,5.18870019419516,3.92125068635479,4.53118284834775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78200456384186,0,0,4.64921157458896,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0085253435176,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,28.8339031212346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,9.27617895381788,2.1218035501107,2.94760543171796,0,0,0,0,0,0,3.70035146516024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0466488552223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89768643453339,0,0,0,0,0,0,0,1.78309414843965,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.17834951836108,2.07507513949254,0.0897576444097721,5.64966333994442,1.91400695839152,0,1.06606955203727,0,0,0,5.18870019419516,3.92125068635479,4.53118284834775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78200456384186,0,0,4.64921157458896,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0085253435176,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,28.8339031212346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,9.27617895381788,2.1218035501107,2.94760543171796,0,0,0,0,0,0,3.70035146516024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:194327155..194327162,- | |||
}} | }} |
Latest revision as of 01:45, 28 July 2015
Short description: | p@chr1:194327155..194327162, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:194327155..194327162, - |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.65e-13 | 3 |
germ line cell | 4.97e-13 | 7 |
germ cell | 4.97e-13 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.65e-13 | 3 |
testis | 2.23e-11 | 8 |
intralobular bile duct | 3.41e-11 | 1 |
acinus | 3.41e-11 | 1 |
intrahepatic bile duct | 3.41e-11 | 1 |
portal lobule | 3.41e-11 | 1 |
hepatic acinus | 3.41e-11 | 1 |
male reproductive organ | 2.05e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.80e-11 | 8 |
organ system benign neoplasm | 8.22e-11 | 1 |
skin benign neoplasm | 8.22e-11 | 1 |
integumentary system benign neoplasm | 8.22e-11 | 1 |
dermis tumor | 8.22e-11 | 1 |
cutaneous fibrous histiocytoma | 8.22e-11 | 1 |