FFCP PHASE1:Hg19::chr1:198990195..198990210,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_ENST00000427439,uc001gva.3_5end | |association_with_transcript=-29bp_to_ENST00000427439,uc001gva.3_5end | ||
|cluster_id=chr1:198990195..198990210,- | |||
|coexpression_cluster_id=C3697 | |coexpression_cluster_id=C3697 | ||
|description=CAGE_peak_1_at_ENST00000427439_5end,CAGE_peak_1_at_uc001gva.3_5end | |description=CAGE_peak_1_at_ENST00000427439_5end,CAGE_peak_1_at_uc001gva.3_5end | ||
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|ontology_enrichment_celltype=CL:0000037!2.86e-10!172;CL:0000566!2.86e-10!172;CL:0002032!1.57e-09!165;CL:0000837!1.57e-09!165;CL:0000988!1.67e-09!182;CL:0000763!1.45e-07!112;CL:0000049!1.45e-07!112 | |ontology_enrichment_celltype=CL:0000037!2.86e-10!172;CL:0000566!2.86e-10!172;CL:0002032!1.57e-09!165;CL:0000837!1.57e-09!165;CL:0000988!1.67e-09!182;CL:0000763!1.45e-07!112;CL:0000049!1.45e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000817;1.34e-23;1 | |ontology_enrichment_celltype_v019=CL:0000817;1.34e-23;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000817,8.96e-09,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1240!6.05e-41!39;DOID:2531!8.99e-35!51;DOID:0060083!8.99e-35!51;DOID:8692!5.59e-29!31;DOID:1036!1.51e-13!8;DOID:0050686!1.02e-10!137;DOID:12603!7.10e-08!1 | |ontology_enrichment_disease=DOID:1240!6.05e-41!39;DOID:2531!8.99e-35!51;DOID:0060083!8.99e-35!51;DOID:8692!5.59e-29!31;DOID:1036!1.51e-13!8;DOID:0050686!1.02e-10!137;DOID:12603!7.10e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:1240;7.06e-20;39!DOID:2531;1.72e-15;51!DOID:0060083;1.72e-15;51!DOID:8692;4.21e-12;31 | |ontology_enrichment_disease_v019=DOID:1240;7.06e-20;39!DOID:2531;1.72e-15;51!DOID:0060083;1.72e-15;51!DOID:8692;4.21e-12;31 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,5.75e-21,51;DOID:0060083,5.75e-21,51;DOID:1240,2.63e-20,39;DOID:8692,9.49e-12,31;DOID:0050686,1.16e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.25e-09!7;UBERON:0002135!4.71e-08!1;UBERON:0002370!7.36e-08!4;UBERON:0005058!7.36e-08!4;UBERON:0009113!7.36e-08!4;UBERON:0003295!7.36e-08!4;UBERON:0005562!7.36e-08!4;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1 | |ontology_enrichment_uberon=UBERON:0004177!3.25e-09!7;UBERON:0002135!4.71e-08!1;UBERON:0002370!7.36e-08!4;UBERON:0005058!7.36e-08!4;UBERON:0009113!7.36e-08!4;UBERON:0003295!7.36e-08!4;UBERON:0005562!7.36e-08!4;UBERON:0002363!1.21e-07!1;UBERON:0007647!1.21e-07!1;UBERON:0010115!1.21e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.19e-12;2!UBERON:0005058;2.19e-12;2!UBERON:0009113;2.19e-12;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;2.19e-12;2!UBERON:0005058;2.19e-12;2!UBERON:0009113;2.19e-12;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.14e-07,4;UBERON:0005058,8.14e-07,4;UBERON:0009113,8.14e-07,4;UBERON:0003295,8.14e-07,4;UBERON:0005562,8.14e-07,4 | |||
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|short_description=p1@ENST00000427439,p1@uc001gva.3 | |short_description=p1@ENST00000427439,p1@uc001gva.3 | ||
}} | }} |
Latest revision as of 01:58, 28 July 2015
Short description: | p1@ENST00000427439, p1@uc001gva.3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000427439_5end, CAGE_peak_1_at_uc001gva.3_5end |
Coexpression cluster: | C3697_non_acute_chronic_thymus_Hodgkin_granulocyte_Saos2 |
Association with transcript: | -29bp_to_ENST00000427439, uc001gva.3_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 8.96e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 8.14e-07 | 4 |
hemolymphoid system gland | 8.14e-07 | 4 |
thymic region | 8.14e-07 | 4 |
pharyngeal gland | 8.14e-07 | 4 |
thymus primordium | 8.14e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.75e-21 | 51 |
immune system cancer | 5.75e-21 | 51 |
leukemia | 2.63e-20 | 39 |
myeloid leukemia | 9.49e-12 | 31 |
organ system cancer | 1.16e-07 | 137 |