FFCP PHASE1:Hg19::chr1:203873170..203873173,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000540496_5end | |association_with_transcript=-23bp_to_ENST00000540496_5end | ||
|cluster_id=chr1:203873170..203873173,- | |||
|description=CAGE_peak_1_at_ENST00000540496_5end | |description=CAGE_peak_1_at_ENST00000540496_5end | ||
|id=chr1:203873170..203873173,- | |id=chr1:203873170..203873173,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.90e-10;12!CL:0002581;1.83e-08;1!CL:0002591;1.83e-08;1 | |ontology_enrichment_celltype_v019=CL:0000182;3.90e-10;12!CL:0002581;1.83e-08;1!CL:0002591;1.83e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.82e-10,12;CL:0002581,1.10e-08,1;CL:0002591,2.64e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.21e-16;11!UBERON:0001041;2.11e-14;30!UBERON:0009497;4.65e-14;13 | |ontology_enrichment_development_v019=UBERON:0004161;1.21e-16;11!UBERON:0001041;2.11e-14;30!UBERON:0009497;4.65e-14;13 | ||
|ontology_enrichment_disease=DOID:162!6.93e-18!235;DOID:14566!1.10e-17!239;DOID:0050686!1.09e-09!137;DOID:0050687!1.24e-08!143;DOID:2531!2.77e-07!51;DOID:0060083!2.77e-07!51 | |ontology_enrichment_disease=DOID:162!6.93e-18!235;DOID:14566!1.10e-17!239;DOID:0050686!1.09e-09!137;DOID:0050687!1.24e-08!143;DOID:2531!2.77e-07!51;DOID:0060083!2.77e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.83e-08;1!DOID:3149;1.83e-08;1 | |ontology_enrichment_disease_v019=DOID:3151;1.83e-08;1!DOID:3149;1.83e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.37e-08,1;DOID:3149,1.37e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.04e-13;19!UBERON:0006925;2.04e-13;19!UBERON:0002423;4.52e-10;25!UBERON:0002426;6.99e-09;1!UBERON:0003831;6.99e-09;1!UBERON:0003898;6.99e-09;1!UBERON:0004830;6.99e-09;1!UBERON:0003830;6.99e-09;1!UBERON:0005175;6.99e-09;1!UBERON:0001774;6.99e-09;1!UBERON:0001103;6.99e-09;1!UBERON:0002365;1.38e-07;31!UBERON:0002330;1.38e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.04e-13;19!UBERON:0006925;2.04e-13;19!UBERON:0002423;4.52e-10;25!UBERON:0002426;6.99e-09;1!UBERON:0003831;6.99e-09;1!UBERON:0003898;6.99e-09;1!UBERON:0004830;6.99e-09;1!UBERON:0003830;6.99e-09;1!UBERON:0005175;6.99e-09;1!UBERON:0001774;6.99e-09;1!UBERON:0001103;6.99e-09;1!UBERON:0002365;1.38e-07;31!UBERON:0002330;1.38e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.80e-13,19;UBERON:0006925,1.80e-13,19;UBERON:0008836,1.80e-13,19;UBERON:0008835,1.45e-11,22;UBERON:0003894,1.45e-11,22;UBERON:0009854,4.88e-11,23;UBERON:0007499,4.11e-10,25;UBERON:0009497,4.11e-10,25;UBERON:0000015,4.11e-10,25;UBERON:0002423,4.11e-10,25;UBERON:0006235,4.11e-10,25;UBERON:0004161,4.11e-10,25;UBERON:0009856,1.06e-09,26;UBERON:0002426,7.56e-09,1;UBERON:0003831,7.56e-09,1;UBERON:0003898,7.56e-09,1;UBERON:0004830,7.56e-09,1;UBERON:0003830,7.56e-09,1;UBERON:0005175,7.56e-09,1;UBERON:0001774,7.56e-09,1;UBERON:0001103,7.56e-09,1;UBERON:0010084,7.56e-09,1;UBERON:0005911,1.27e-08,82;UBERON:0002365,4.75e-08,31;UBERON:0002330,4.75e-08,31;UBERON:0003929,1.77e-07,54;UBERON:0000949,3.43e-07,45;UBERON:0002368,4.57e-07,35;UBERON:0005177,9.65e-07,101 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0.547497700291537,0.125542639594803,0.534893840235659,0.246301768349837,0.393553906568396,0,0,0.309632246632152,0.919421224478927,0,0,0.232401601740905,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.490385709340376,0.151357427644931,0,0,0.312160076830321,0,0,0,0.323745888736263,0.561803226808994,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0,0.355009592516614,0.10075209822764,0,0,0.545492241181669,0,0.365921118388786,0.132529768321485,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.473227200159376,0.168584690078102,0.241011029883482,0.330881918197182,0.435758888184812,0.237270619111097,0.539325232640658,0.196221465125346,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0.686271241194102,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.577465791044295,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.12624243342638,0.380987365753014,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0.896681151948218,0,0,0.128343036279748,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0.321707842287215,1.48418066444991,0.154209693802656,0,0.164254312027618,0,0.116210378459959,1.0877350463246,0,0,0.229628896329213,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.515205058238611,0.0915694648183434,0,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0.214840489736547,0,0.170453254832202,0,0,0,0,0.30347334256665,0.464845549297286,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0.235624804691373,0,1.58510321173008,0.421258456238981,0,0,0,0.136499911407986,0.141405431953713,1.13008116620243,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.564862804660675,0.43050537267123,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.854592569019785,0,0.245040215981032,0.557409525377156,0.721346064882224,0.426851060090485,0.318852545457645,0.199579371432817,0.191505370132367,0,0.649243880549111,0,0.456469358066384,0.313359791546046,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0.307240764308458,0.447352215784832,0.333698283423817,0,0,0,0.270455678475983,0,1.4098700508785,0.748562161632879,0.146508179271894,0.121360521749513,0,0,0,0,0.307160702099232,0,0,0,0.329607748453519,0,0.398495976502139,0,1.0077309914171,0.102268682502155,0,0,0,0.358042349351218,0.511572370226872,0.0986434056369336,0,0,0,0.185536196323703,1.99613798001194,0.260427761085233,0,1.44999915086959,0.227586896570999,0.508507300585533,0,0,0.583209226766509,0.173624994933292,0.885741385813839,0.361789315876224,0,0.221158519862449,0.295547618953547,0,0.21787692703798,0,0,0,0.46112780877612,0.269272933229316,0.108647371922008,0.957003479195758,0.0915975934018623,0.533034776018635,1.02193298195737,0.941881538370149,0.166211681900156,0.225595660617181,0.392125068635479,0.335643173951685,0.189753732724185,0,0.210998064528027,0.652931232636591,0.424059214301822,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0.313265848516366,0.134802265961354,2.40773294189637,0.234264445725339,0.547364367646998,0,0.242780379534093,0,0,0,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0.416024019039416,0.347119476670262,0,0.522355239482415,0.17472666824203,0.171986032471617,0.774050650312681,0.146178634172371,1.23173185579814,0.0969890164884194,0.0882561266915003,0.225980740780532,0.274083849293502,0.794858446811959,0,0.391102765469606,0,0,0,0.144090417154106,0.114536596165916,0.343189995723929,0.432164393964449,0.248505071130865,0.235694034616795,0.271808412147228,0,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0.399358000997982,0,0,0.268733889946905,0,0,3.07254410998172,3.95596120229599,2.76354529802158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| ||
|short_description=p1@ENST00000540496 | |short_description=p1@ENST00000540496 | ||
}} | }} |
Latest revision as of 02:32, 28 July 2015
Short description: | p1@ENST00000540496 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000540496_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000540496_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.82e-10 | 12 |
perirenal preadipocyte | 1.10e-08 | 1 |
smooth muscle cell of the pulmonary artery | 2.64e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.80e-13 | 19 |
digestive gland | 1.80e-13 | 19 |
liver bud | 1.80e-13 | 19 |
hepatic diverticulum | 1.45e-11 | 22 |
liver primordium | 1.45e-11 | 22 |
digestive tract diverticulum | 4.88e-11 | 23 |
epithelial sac | 4.11e-10 | 25 |
epithelium of foregut-midgut junction | 4.11e-10 | 25 |
anatomical boundary | 4.11e-10 | 25 |
hepatobiliary system | 4.11e-10 | 25 |
foregut-midgut junction | 4.11e-10 | 25 |
septum transversum | 4.11e-10 | 25 |
sac | 1.06e-09 | 26 |
chest muscle | 7.56e-09 | 1 |
respiratory system muscle | 7.56e-09 | 1 |
skeletal muscle of trunk | 7.56e-09 | 1 |
respiratory system skeletal muscle | 7.56e-09 | 1 |
thoracic segment muscle | 7.56e-09 | 1 |
chest organ | 7.56e-09 | 1 |
muscle of trunk | 7.56e-09 | 1 |
diaphragm | 7.56e-09 | 1 |
future diaphragm | 7.56e-09 | 1 |
endo-epithelium | 1.27e-08 | 82 |
exocrine gland | 4.75e-08 | 31 |
exocrine system | 4.75e-08 | 31 |
gut epithelium | 1.77e-07 | 54 |
endocrine system | 3.43e-07 | 45 |
endocrine gland | 4.57e-07 | 35 |
trunk region element | 9.65e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.37e-08 | 1 |
keratoacanthoma | 1.37e-08 | 1 |