FFCP PHASE1:Hg19::chr1:234149057..234149066,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:234149057..234149066,+ | |||
|coexpression_cluster_id=C3951 | |coexpression_cluster_id=C3951 | ||
|description=CAGE_peak_at_chr1:234149057..234149066,+ | |description=CAGE_peak_at_chr1:234149057..234149066,+ | ||
|id=chr1:234149057..234149066,+ | |id=chr1:234149057..234149066,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0002605!2.87e-09!3 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0001873;1.55e-98;2!UBERON:0005383;2.39e-66;3!UBERON:0005382;2.39e-66;3!UBERON:0000369;3.10e-50;4!UBERON:0002435;3.10e-50;4!UBERON:0000204;3.10e-50;4!UBERON:0009663;1.78e-29;7!UBERON:0002420;2.62e-23;9!UBERON:0000125;2.62e-23;9!UBERON:0007245;2.62e-23;9!UBERON:0002308;2.62e-23;9!UBERON:0010009;2.62e-23;9!UBERON:0010011;2.62e-23;9!UBERON:0000454;2.62e-23;9!UBERON:0002780;4.53e-08;41!UBERON:0001890;4.53e-08;41!UBERON:0002791;2.32e-07;32!UBERON:0001869;2.32e-07;32 | |ontology_enrichment_development_v019=UBERON:0010122;1.55e-98;2 | ||
|ontology_enrichment_disease=DOID:6193!1.25e-07!1;DOID:3112!2.35e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!6.19e-44!32;UBERON:0002791!1.51e-42!33;UBERON:0002020!3.09e-41!34;UBERON:0003528!3.09e-41!34;UBERON:0001893!3.09e-41!34;UBERON:0002780!2.04e-38!41;UBERON:0001890!2.04e-38!41;UBERON:0006240!2.04e-38!41;UBERON:0001049!9.69e-38!57;UBERON:0005068!9.69e-38!57;UBERON:0006241!9.69e-38!57;UBERON:0007135!9.69e-38!57;UBERON:0003080!1.93e-37!42;UBERON:0002616!2.41e-36!59;UBERON:0000955!1.74e-33!69;UBERON:0006238!1.74e-33!69;UBERON:0001017!1.49e-30!82;UBERON:0005743!5.84e-29!86;UBERON:0000956!4.16e-26!25;UBERON:0000203!4.16e-26!25;UBERON:0000073!7.43e-26!94;UBERON:0001016!7.43e-26!94;UBERON:0003056!6.94e-25!61;UBERON:0002420!1.40e-24!9;UBERON:0007245!1.40e-24!9;UBERON:0010009!1.40e-24!9;UBERON:0010011!1.40e-24!9;UBERON:0000454!1.40e-24!9;UBERON:0003075!8.83e-24!86;UBERON:0007284!8.83e-24!86;UBERON:0002346!1.49e-22!90;UBERON:0009663!3.86e-22!7;UBERON:0002619!9.47e-20!22;UBERON:0000033!4.09e-19!123;UBERON:0002771!1.36e-18!3;UBERON:0000153!4.95e-18!129;UBERON:0007811!4.95e-18!129;UBERON:0001950!2.98e-17!20;UBERON:0002308!3.48e-17!9;UBERON:0000125!3.48e-17!9;UBERON:0007023!4.09e-15!115;UBERON:0000369!1.45e-14!4;UBERON:0002435!1.45e-14!4;UBERON:0000204!1.45e-14!4;UBERON:0010082!1.45e-14!4;UBERON:0001875!1.33e-13!2;UBERON:0006514!1.33e-13!2;UBERON:0004121!1.30e-12!169;UBERON:0001871!2.02e-12!7;UBERON:0000924!3.19e-12!173;UBERON:0006601!3.19e-12!173;UBERON:0000025!8.15e-12!194;UBERON:0000349!1.86e-11!5;UBERON:0000200!1.45e-09!6;UBERON:0005383!1.48e-09!3;UBERON:0005382!1.48e-09!3;UBERON:0004111!1.29e-08!241;UBERON:0000477!2.83e-08!286;UBERON:0003112!1.03e-07!1;UBERON:0000032!1.03e-07!1;UBERON:0005253!1.03e-07!1;UBERON:0003128!1.03e-07!1;UBERON:0002241!1.03e-07!1;UBERON:0001703!1.03e-07!1;UBERON:0004761!1.03e-07!1;UBERON:0009617!1.03e-07!1;UBERON:0001874!1.10e-07!1;UBERON:0001882!4.61e-07!1;UBERON:0005403!4.61e-07!1;UBERON:0002022!4.90e-07!1;UBERON:0000064!6.00e-07!219;UBERON:0000475!6.44e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001873;1.55e-98;2!UBERON:0005383;2.39e-66;3!UBERON:0005382;2.39e-66;3!UBERON:0000369;3.10e-50;4!UBERON:0002435;3.10e-50;4!UBERON:0000204;3.10e-50;4!UBERON:0009663;1.78e-29;7!UBERON:0002420;2.62e-23;9!UBERON:0000125;2.62e-23;9!UBERON:0007245;2.62e-23;9!UBERON:0002308;2.62e-23;9!UBERON:0010009;2.62e-23;9!UBERON:0010011;2.62e-23;9!UBERON:0000454;2.62e-23;9!UBERON:0002780;4.53e-08;41!UBERON:0001890;4.53e-08;41!UBERON:0002791;2.32e-07;32!UBERON:0001869;2.32e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.55e-98,2;UBERON:0010122,1.55e-98,2;UBERON:0005383,2.39e-66,3;UBERON:0005382,2.39e-66,3;UBERON:0000369,3.10e-50,4;UBERON:0002435,3.10e-50,4;UBERON:0000204,3.10e-50,4;UBERON:0010082,3.10e-50,4;UBERON:0009663,1.78e-29,7;UBERON:0002420,2.62e-23,9;UBERON:0000125,2.62e-23,9;UBERON:0007245,2.62e-23,9;UBERON:0002308,2.62e-23,9;UBERON:0010009,2.62e-23,9;UBERON:0010011,2.62e-23,9;UBERON:0000454,2.62e-23,9;UBERON:0002791,1.82e-07,32;UBERON:0001869,1.82e-07,32;UBERON:0003528,4.03e-07,34;UBERON:0002020,4.03e-07,34;UBERON:0001893,4.03e-07,34 | |||
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|short_description=p@chr1:234149057..234149066,+ | |short_description=p@chr1:234149057..234149066,+ | ||
}} | }} |
Latest revision as of 05:08, 28 July 2015
Short description: | p@chr1:234149057..234149066, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:234149057..234149066, + |
Coexpression cluster: | C3951_caudate_putamen_mucinous_large_clear_nucleus_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.55e-98 | 2 |
future caudate nucleus | 1.55e-98 | 2 |
caudate-putamen | 2.39e-66 | 3 |
dorsal striatum | 2.39e-66 | 3 |
corpus striatum | 3.10e-50 | 4 |
striatum | 3.10e-50 | 4 |
ventral part of telencephalon | 3.10e-50 | 4 |
future corpus striatum | 3.10e-50 | 4 |
telencephalic nucleus | 1.78e-29 | 7 |
basal ganglion | 2.62e-23 | 9 |
neural nucleus | 2.62e-23 | 9 |
nuclear complex of neuraxis | 2.62e-23 | 9 |
nucleus of brain | 2.62e-23 | 9 |
aggregate regional part of brain | 2.62e-23 | 9 |
collection of basal ganglia | 2.62e-23 | 9 |
cerebral subcortex | 2.62e-23 | 9 |
regional part of telencephalon | 1.82e-07 | 32 |
cerebral hemisphere | 1.82e-07 | 32 |
brain grey matter | 4.03e-07 | 34 |
gray matter | 4.03e-07 | 34 |
telencephalon | 4.03e-07 | 34 |