FFCP PHASE1:Hg19::chr1:27181551..27181558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:27181551..27181558,- | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_at_chr1:27181551..27181558,- | |description=CAGE_peak_at_chr1:27181551..27181558,- | ||
|id=chr1:27181551..27181558,- | |id=chr1:27181551..27181558,- | ||
|ontology_enrichment_celltype=CL:0002076!1.61e-16!43;CL:0000244!4.32e-16!4;CL:0000731!4.32e-16!4;CL:0001014!3.97e-15!2;CL:0001016!3.97e-15!2;CL:0000223!8.24e-14!59;CL:0002368!9.48e-13!13;CL:0002251!1.16e-10!21;CL:0002328!2.11e-10!3;CL:0000066!2.18e-08!254;CL:0002327!9.32e-08!4;CL:0002336!1.21e-07!1;CL:0002261!1.21e-07!1;CL:0002170!1.21e-07!1 | |ontology_enrichment_celltype=CL:0002076!1.61e-16!43;CL:0000244!4.32e-16!4;CL:0000731!4.32e-16!4;CL:0001014!3.97e-15!2;CL:0001016!3.97e-15!2;CL:0000223!8.24e-14!59;CL:0002368!9.48e-13!13;CL:0002251!1.16e-10!21;CL:0002328!2.11e-10!3;CL:0000066!2.18e-08!254;CL:0002327!9.32e-08!4;CL:0002336!1.21e-07!1;CL:0002261!1.21e-07!1;CL:0002170!1.21e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.74e-50;2!CL:0001016;2.74e-50;2!CL:0002328;5.96e-34;3!CL:0000453;4.21e-21;5!CL:0000840;7.67e-18;5!CL:0000990;2.19e-12;8!CL:0002202;2.45e-12;9!CL:0002632;2.45e-12;9!CL:0000451;2.16e-10;10!CL:0002368;5.70e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.74e-50,2;CL:0001016,2.74e-50,2;CL:0002328,5.96e-34,3;CL:0000453,4.21e-21,5;CL:0000840,7.67e-18,5;CL:0001029,7.67e-18,5;CL:0000990,2.19e-12,8;CL:0002202,2.45e-12,9;CL:0002632,2.45e-12,9;CL:0000451,2.16e-10,10;CL:0002368,5.70e-09,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!3.83e-08!1;DOID:3149!3.83e-08!1;DOID:1749!1.40e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!1.26e-20!5;UBERON:0003343!5.26e-15!4;UBERON:0004785!5.26e-15!4;UBERON:0000344!3.29e-13!12;UBERON:0000365!5.56e-13!5;UBERON:0005910!6.68e-11!6;UBERON:0000166!1.10e-10!21;UBERON:0000165!1.53e-10!28;UBERON:0000930!1.53e-10!28;UBERON:0004815!2.11e-10!3;UBERON:0002031!2.11e-10!3;UBERON:0001723!8.58e-10!3;UBERON:0001033!8.58e-10!3;UBERON:0010056!8.58e-10!3;UBERON:0001004!4.21e-09!72;UBERON:0004119!4.73e-09!169;UBERON:0000925!4.73e-09!169;UBERON:0006595!4.73e-09!169;UBERON:0002185!5.23e-08!4;UBERON:0000997!5.40e-08!1;UBERON:0005056!5.40e-08!1;UBERON:0002372!7.59e-08!1;UBERON:0001961!7.59e-08!1;UBERON:0001744!7.59e-08!1;UBERON:0001735!7.59e-08!1;UBERON:0001911!9.32e-08!4;UBERON:0005333!9.32e-08!4;UBERON:0008425!9.32e-08!4;UBERON:0005311!9.32e-08!4;UBERON:0001444!1.37e-07!48;UBERON:0000065!6.56e-07!53 | |ontology_enrichment_uberon=UBERON:0003729!1.26e-20!5;UBERON:0003343!5.26e-15!4;UBERON:0004785!5.26e-15!4;UBERON:0000344!3.29e-13!12;UBERON:0000365!5.56e-13!5;UBERON:0005910!6.68e-11!6;UBERON:0000166!1.10e-10!21;UBERON:0000165!1.53e-10!28;UBERON:0000930!1.53e-10!28;UBERON:0004815!2.11e-10!3;UBERON:0002031!2.11e-10!3;UBERON:0001723!8.58e-10!3;UBERON:0001033!8.58e-10!3;UBERON:0010056!8.58e-10!3;UBERON:0001004!4.21e-09!72;UBERON:0004119!4.73e-09!169;UBERON:0000925!4.73e-09!169;UBERON:0006595!4.73e-09!169;UBERON:0002185!5.23e-08!4;UBERON:0000997!5.40e-08!1;UBERON:0005056!5.40e-08!1;UBERON:0002372!7.59e-08!1;UBERON:0001961!7.59e-08!1;UBERON:0001744!7.59e-08!1;UBERON:0001735!7.59e-08!1;UBERON:0001911!9.32e-08!4;UBERON:0005333!9.32e-08!4;UBERON:0008425!9.32e-08!4;UBERON:0005311!9.32e-08!4;UBERON:0001444!1.37e-07!48;UBERON:0000065!6.56e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;5.96e-34;3!UBERON:0002031;5.96e-34;3!UBERON:0002185;5.15e-21;5!UBERON:0000485;1.91e-15;7!UBERON:0007196;5.93e-08;15!UBERON:0001558;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,5.96e-34,3;UBERON:0002031,5.96e-34,3;UBERON:0002185,5.15e-21,5;UBERON:0000485,2.45e-12,9;UBERON:0007196,5.93e-08,15;UBERON:0001558,5.93e-08,15 | |||
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|short_description=p@chr1:27181551..27181558,- | |short_description=p@chr1:27181551..27181558,- | ||
}} | }} |
Latest revision as of 06:41, 28 July 2015
Short description: | p@chr1:27181551..27181558, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:27181551..27181558, - |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.74e-50 | 2 |
immature CD1a-positive Langerhans cell | 2.74e-50 | 2 |
bronchial epithelial cell | 5.96e-34 | 3 |
Langerhans cell | 4.21e-21 | 5 |
immature conventional dendritic cell | 7.67e-18 | 5 |
common dendritic progenitor | 7.67e-18 | 5 |
conventional dendritic cell | 2.19e-12 | 8 |
epithelial cell of tracheobronchial tree | 2.45e-12 | 9 |
epithelial cell of lower respiratory tract | 2.45e-12 | 9 |
dendritic cell | 2.16e-10 | 10 |
respiratory epithelial cell | 5.70e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 5.96e-34 | 3 |
epithelium of bronchus | 5.96e-34 | 3 |
bronchus | 5.15e-21 | 5 |
simple columnar epithelium | 2.45e-12 | 9 |
tracheobronchial tree | 5.93e-08 | 15 |
lower respiratory tract | 5.93e-08 | 15 |