FFCP PHASE1:Hg19::chr1:43903108..43903109,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:43903108..43903109,-
|short_description=p1@AK097620
|description=CAGE_peak_1_at_AK097620_5end
|association_with_transcript=472bp_to_AK097620_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=472bp_to_AK097620_5end | |||
|cluster_id=chr1:43903108..43903109,- | |||
|description=CAGE_peak_1_at_AK097620_5end | |||
|id=chr1:43903108..43903109,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000317;1.14e-13;2!CL:1000448;1.14e-13;2!CL:0002308;1.14e-13;2!CL:0002140;1.14e-13;2!CL:0000775;1.47e-09;3!CL:0002327;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,9.40e-14,2;CL:1000448,9.40e-14,2;CL:0002308,9.40e-14,2;CL:0002140,9.40e-14,2;CL:0000775,1.19e-09,3;CL:0002327,2.04e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;6.72e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.75e-07;4!DOID:1612;1.75e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.04e-07,4;DOID:1612,2.04e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;6.72e-26;1!UBERON:0002171;6.72e-26;1!UBERON:0006518;6.72e-26;1!UBERON:0008949;6.72e-26;1!UBERON:0000101;6.72e-26;1!UBERON:0002167;6.72e-26;1!UBERON:0002419;1.14e-13;2!UBERON:0007771;1.14e-13;2!UBERON:0003297;1.14e-13;2!UBERON:0001821;1.14e-13;2!UBERON:0003487;1.14e-13;2!UBERON:0001820;1.14e-13;2!UBERON:0001911;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,5.93e-26,1;UBERON:0006518,5.93e-26,1;UBERON:0008949,5.93e-26,1;UBERON:0000101,5.93e-26,1;UBERON:0002167,5.93e-26,1;UBERON:0007195,9.79e-26,1;UBERON:0002419,9.40e-14,2;UBERON:0007771,9.40e-14,2;UBERON:0003297,9.40e-14,2;UBERON:0001821,9.40e-14,2;UBERON:0003487,9.40e-14,2;UBERON:0001820,9.40e-14,2;UBERON:0005089,9.40e-14,2;UBERON:0005088,9.40e-14,2;UBERON:0001911,2.04e-07,4;UBERON:0005333,2.04e-07,4;UBERON:0008425,2.04e-07,4;UBERON:0005311,2.04e-07,4 | |||
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| ||
|short_description=p1@AK097620 | |||
}} | }} |
Latest revision as of 08:27, 28 July 2015
Short description: | p1@AK097620 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK097620_5end |
Coexpression cluster: | NA |
Association with transcript: | 472bp_to_AK097620_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 9.40e-14 | 2 |
epithelial cell of sweat gland | 9.40e-14 | 2 |
epithelial cell of skin gland | 9.40e-14 | 2 |
acinar cell of sebaceous gland | 9.40e-14 | 2 |
neutrophil | 1.19e-09 | 3 |
mammary gland epithelial cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 5.93e-26 | 1 |
right lung lobe | 5.93e-26 | 1 |
lower lobe of lung | 5.93e-26 | 1 |
lobe of lung | 5.93e-26 | 1 |
right lung | 5.93e-26 | 1 |
stroma of bone marrow | 9.79e-26 | 1 |
skin gland | 9.40e-14 | 2 |
epidermis gland | 9.40e-14 | 2 |
gland of integumental system | 9.40e-14 | 2 |
sebaceous gland | 9.40e-14 | 2 |
skin sebaceous gland | 9.40e-14 | 2 |
sweat gland | 9.40e-14 | 2 |
sweat gland placode | 9.40e-14 | 2 |
sebaceous gland placode | 9.40e-14 | 2 |
mammary gland | 2.04e-07 | 4 |
mammary bud | 2.04e-07 | 4 |
mammary ridge | 2.04e-07 | 4 |
mammary placode | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.04e-07 | 4 |
breast cancer | 2.04e-07 | 4 |