FFCP PHASE1:Hg19::chr1:71872106..71872111,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:71872106..71872111,- | |||
|description=CAGE_peak_at_chr1:71872106..71872111,- | |description=CAGE_peak_at_chr1:71872106..71872111,- | ||
|id=chr1:71872106..71872111,- | |id=chr1:71872106..71872111,- | ||
|ontology_enrichment_celltype=CL:0000569!4.87e-07!4;CL:0000011!4.87e-07!4 | |ontology_enrichment_celltype=CL:0000569!4.87e-07!4;CL:0000011!4.87e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000511;6.72e-26;1!CL:0002625;6.72e-26;1!CL:0000216;6.72e-26;1!CL:0002615;1.01e-09;3!CL:0000135;1.47e-09;3!CL:0002580;1.47e-09;3!CL:0000388;1.47e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.58e-26,1;CL:0002625,3.58e-26,1;CL:0000216,3.58e-26,1;CL:0002615,1.01e-09,3;CL:0000135,1.67e-09,3;CL:0000388,1.67e-09,3;CL:0002580,1.81e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.85e-17!22;UBERON:0001950!4.95e-17!20;UBERON:0001893!1.13e-15!34;UBERON:0002020!1.65e-15!34;UBERON:0003528!1.65e-15!34;UBERON:0001869!3.70e-15!32;UBERON:0000956!1.34e-14!25;UBERON:0000203!1.34e-14!25;UBERON:0002791!1.50e-14!33;UBERON:0002780!1.75e-13!41;UBERON:0001890!1.75e-13!41;UBERON:0006240!1.75e-13!41;UBERON:0003080!5.03e-13!42;UBERON:0007023!1.36e-12!115;UBERON:0001049!1.63e-12!57;UBERON:0005068!1.63e-12!57;UBERON:0006241!1.63e-12!57;UBERON:0007135!1.63e-12!57;UBERON:0003056!6.93e-10!61;UBERON:0002616!1.31e-09!59;UBERON:0002021!4.41e-09!5;UBERON:0001872!1.53e-08!5;UBERON:0002346!3.38e-08!90;UBERON:0003075!3.73e-08!86;UBERON:0007284!3.73e-08!86;UBERON:0000955!4.90e-08!69;UBERON:0006238!4.90e-08!69;UBERON:0000200!1.93e-07!6;UBERON:0001017!2.55e-07!82;UBERON:0005743!2.59e-07!86;UBERON:0000073!3.37e-07!94;UBERON:0001016!3.37e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;6.72e-26;1!UBERON:0001343;6.72e-26;1!UBERON:0002426;6.72e-26;1!UBERON:0003831;6.72e-26;1!UBERON:0003898;6.72e-26;1!UBERON:0004830;6.72e-26;1!UBERON:0003830;6.72e-26;1!UBERON:0005175;6.72e-26;1!UBERON:0001774;6.72e-26;1!UBERON:0004910;6.72e-26;1!UBERON:0004813;6.72e-26;1!UBERON:0001103;6.72e-26;1!UBERON:0002771;7.30e-14;2!UBERON:0005090;1.14e-13;2!UBERON:0001630;1.14e-13;2!UBERON:0004909;1.14e-13;2!UBERON:0001443;5.79e-10;11!UBERON:0007846;1.47e-09;3!UBERON:0000043;1.47e-09;3!UBERON:0007845;1.47e-09;3!UBERON:0005904;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.58e-26,1;UBERON:0001343,3.58e-26,1;UBERON:0004910,3.58e-26,1;UBERON:0005154,3.58e-26,1;UBERON:0005295,3.58e-26,1;UBERON:0004813,3.58e-26,1;UBERON:0005297,3.58e-26,1;UBERON:0005294,3.58e-26,1;UBERON:0010141,3.58e-26,1;UBERON:0005891,3.58e-26,1;UBERON:0002426,4.61e-26,1;UBERON:0003831,4.61e-26,1;UBERON:0003898,4.61e-26,1;UBERON:0004830,4.61e-26,1;UBERON:0003830,4.61e-26,1;UBERON:0005175,4.61e-26,1;UBERON:0001774,4.61e-26,1;UBERON:0001103,4.61e-26,1;UBERON:0010084,4.61e-26,1;UBERON:0002771,7.30e-14,2;UBERON:0004909,8.28e-14,2;UBERON:0005090,9.40e-14,2;UBERON:0001630,9.40e-14,2;UBERON:0001443,6.06e-10,11;UBERON:0007846,1.67e-09,3;UBERON:0000043,1.67e-09,3;UBERON:0007845,1.67e-09,3;UBERON:0005904,1.49e-07,4 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,5.00366491765652,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0.579386075843295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0.30239029332968,0.496215615637554,0,1.12264037773229,0,0.511707249066704,0.160853921143607,0,0,0.532685175939381,0,0,0.116210378459959,0,0,0,0,0.364182336013434,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0,0,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0.241192877250816,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,3.17268288745104,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0.378806010550178,0,0.889811221596536,0.228840068396924,0.151230923763239,0.15543720058278,0.591420599958536,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0.159633859057151,0.82046545696302,0.252071696221718,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0,0.297046400327086,0.4226557275834,0.509781344063451,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,0.371995018166751,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,5.00366491765652,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0,0.579386075843295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0.30239029332968,0.496215615637554,0,1.12264037773229,0,0.511707249066704,0.160853921143607,0,0,0.532685175939381,0,0,0.116210378459959,0,0,0,0,0.364182336013434,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0,0,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0.694499979733169,0,0.241192877250816,0,0,0.591095237907095,0,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.179287339332845,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,3.17268288745104,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0.378806010550178,0,0.889811221596536,0.228840068396924,0.151230923763239,0.15543720058278,0.591420599958536,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,1.41696576325585,0.159633859057151,0.82046545696302,0.252071696221718,0.207471757392654,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0.198950775161368,0,0,0,0,0,0.218559560503957,0,0.490296643507811,0,0,0.297046400327086,0.4226557275834,0.509781344063451,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0.5290268405154,0.371995018166751,0.924351257262837,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:71872106..71872111,- | |short_description=p@chr1:71872106..71872111,- | ||
}} | }} |
Latest revision as of 10:14, 28 July 2015
Short description: | p@chr1:71872106..71872111, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:71872106..71872111, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.58e-26 | 1 |
seminiferous tubule epithelial cell | 3.58e-26 | 1 |
Sertoli cell | 3.58e-26 | 1 |
adipocyte of omentum tissue | 1.01e-09 | 3 |
fibrocyte | 1.67e-09 | 3 |
tendon cell | 1.67e-09 | 3 |
preadipocyte of the breast | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.58e-26 | 1 |
seminiferous tubule of testis | 3.58e-26 | 1 |
epithelium of male gonad | 3.58e-26 | 1 |
epithelial cord | 3.58e-26 | 1 |
sex cord | 3.58e-26 | 1 |
seminiferous tubule epithelium | 3.58e-26 | 1 |
testis sex cord | 3.58e-26 | 1 |
genital ridge | 3.58e-26 | 1 |
primitive sex cord of indifferent gonad | 3.58e-26 | 1 |
coelomic epithelium | 3.58e-26 | 1 |
chest muscle | 4.61e-26 | 1 |
respiratory system muscle | 4.61e-26 | 1 |
skeletal muscle of trunk | 4.61e-26 | 1 |
respiratory system skeletal muscle | 4.61e-26 | 1 |
thoracic segment muscle | 4.61e-26 | 1 |
chest organ | 4.61e-26 | 1 |
muscle of trunk | 4.61e-26 | 1 |
diaphragm | 4.61e-26 | 1 |
future diaphragm | 4.61e-26 | 1 |
middle temporal gyrus | 7.30e-14 | 2 |
epithelium of gonad | 8.28e-14 | 2 |
muscle structure | 9.40e-14 | 2 |
muscle organ | 9.40e-14 | 2 |
chest | 6.06e-10 | 11 |
dense regular connective tissue | 1.67e-09 | 3 |
tendon | 1.67e-09 | 3 |
regular connective tissue | 1.67e-09 | 3 |
duct of male reproductive system | 1.49e-07 | 4 |