FFCP PHASE1:Hg19::chr1:78475616..78475640,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:78475616..78475640,+ | |||
|coexpression_cluster_id=C181 | |coexpression_cluster_id=C181 | ||
|description=CAGE_peak_at_chr1:78475616..78475640,+ | |description=CAGE_peak_at_chr1:78475616..78475640,+ | ||
|id=chr1:78475616..78475640,+ | |id=chr1:78475616..78475640,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.69e-12!24;CL:0000071!3.48e-09!18;CL:0002546!3.48e-09!18;CL:0000213!7.75e-09!57;CL:0000215!7.75e-09!57;CL:0000222!3.39e-08!119;CL:0002078!5.38e-08!44;CL:1000413!5.75e-08!9;CL:0000115!1.16e-07!35;CL:0000515!1.58e-07!4 | |ontology_enrichment_celltype=CL:0002139!2.69e-12!24;CL:0000071!3.48e-09!18;CL:0002546!3.48e-09!18;CL:0000213!7.75e-09!57;CL:0000215!7.75e-09!57;CL:0000222!3.39e-08!119;CL:0002078!5.38e-08!44;CL:1000413!5.75e-08!9;CL:0000115!1.16e-07!35;CL:0000515!1.58e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000515;3.38e-25;3!CL:0000056;3.57e-19;4!CL:0000680;2.18e-11;7!CL:0002545;2.99e-10;2!CL:0002521;2.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,3.26e-19,4;CL:0002545,3.27e-10,2;CL:0002521,2.32e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000515;3.57e-19;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.48e-09!18;UBERON:0004638!3.48e-09!18;UBERON:0004852!3.48e-09!18;UBERON:0003915!5.75e-08!9;UBERON:0004700!5.75e-08!9;UBERON:0001917!5.75e-08!9;UBERON:0006914!9.70e-08!25;UBERON:0000487!3.03e-07!22;UBERON:0002081!4.05e-07!2 | |ontology_enrichment_uberon=UBERON:0001986!3.48e-09!18;UBERON:0004638!3.48e-09!18;UBERON:0004852!3.48e-09!18;UBERON:0003915!5.75e-08!9;UBERON:0004700!5.75e-08!9;UBERON:0001917!5.75e-08!9;UBERON:0006914!9.70e-08!25;UBERON:0000487!3.03e-07!22;UBERON:0002081!4.05e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.88e-19;1!UBERON:0002134;3.91e-19;1!UBERON:0005208;3.91e-19;1!UBERON:0004145;3.91e-19;1!UBERON:0005946;3.91e-19;1!UBERON:0005965;3.91e-19;1!UBERON:0002078;3.91e-19;1!UBERON:0001905;2.99e-10;2!UBERON:0005800;2.99e-10;2!UBERON:0002757;2.99e-10;2!UBERON:0010134;2.99e-10;2!UBERON:0002081;2.99e-10;2!UBERON:0002133;2.99e-10;2!UBERON:0005408;2.99e-10;2!UBERON:0001515;2.99e-10;2!UBERON:0001899;2.99e-10;2!UBERON:0002190;2.32e-07;3!UBERON:0003978;2.97e-07;3!UBERON:0004151;2.97e-07;3!UBERON:0000946;2.97e-07;3!UBERON:0002371;6.16e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.25e-19,1;UBERON:0002134,3.25e-19,1;UBERON:0005208,3.25e-19,1;UBERON:0005946,3.25e-19,1;UBERON:0005965,3.25e-19,1;UBERON:0002078,3.25e-19,1;UBERON:0002081,2.72e-10,2;UBERON:0002133,2.72e-10,2;UBERON:0010227,2.72e-10,2;UBERON:0005800,3.27e-10,2;UBERON:0001515,3.27e-10,2;UBERON:0001905,3.58e-10,2;UBERON:0002757,3.58e-10,2;UBERON:0010134,3.58e-10,2;UBERON:0005408,3.58e-10,2;UBERON:0001899,3.58e-10,2;UBERON:0002190,2.32e-07,3;UBERON:0003978,2.79e-07,3;UBERON:0009751,2.79e-07,3;UBERON:0004151,2.79e-07,3;UBERON:0000946,2.79e-07,3;UBERON:0002523,2.79e-07,3;UBERON:0005983,2.79e-07,3;UBERON:0004145,2.79e-07,3;UBERON:0002165,2.79e-07,3;UBERON:0002062,2.79e-07,3;UBERON:0007280,2.79e-07,3 | |||
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|phase1_expression=0.908391896352783,0.214100523890983,0.563817616383885,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0.550236083880135,0.417989933073621,0,0,0.33472061276467,0.402829317109147,0.760272105718513,0,1.10298924103761,0,0,0,0,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0,0.839910640994298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,2.89562613335158,0.410952645100767,3.9393411912777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.392996164052485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,2.22273980289274,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,1.43574604915363,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,21.9800548103194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,1.77962244319307,0,0.302461847526478,0,0,0,0,0,0,0.797525143673985,0,0,1.14241563650639,0.813741466409323,0,0,0,0.398095888698616,4.00027764663154,0,0,0,0.385239660814607,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:78475616..78475640,+ | |short_description=p@chr1:78475616..78475640,+ | ||
}} | }} |
Latest revision as of 10:30, 28 July 2015
Short description: | p@chr1:78475616..78475640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:78475616..78475640, + |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 3.26e-19 | 4 |
thoracic aorta endothelial cell | 3.27e-10 | 2 |
subcutaneous fat cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.25e-19 | 1 |
tricuspid valve | 3.25e-19 | 1 |
right atrium valve | 3.25e-19 | 1 |
outflow tract of atrium | 3.25e-19 | 1 |
outflow part of right atrium | 3.25e-19 | 1 |
right cardiac atrium | 3.25e-19 | 1 |
cardiac atrium | 2.72e-10 | 2 |
atrioventricular valve | 2.72e-10 | 2 |
future cardiac atrium | 2.72e-10 | 2 |
segment of aorta | 3.27e-10 | 2 |
thoracic aorta | 3.27e-10 | 2 |
pineal body | 3.58e-10 | 2 |
regional part of epithalamus | 3.58e-10 | 2 |
secretory circumventricular organ | 3.58e-10 | 2 |
circumventricular organ | 3.58e-10 | 2 |
epithalamus | 3.58e-10 | 2 |
subcutaneous adipose tissue | 2.32e-07 | 3 |
valve | 2.79e-07 | 3 |
cardiac mesenchyme | 2.79e-07 | 3 |
cardiac chamber | 2.79e-07 | 3 |
cardial valve | 2.79e-07 | 3 |
tunica intima | 2.79e-07 | 3 |
heart layer | 2.79e-07 | 3 |
outflow tract | 2.79e-07 | 3 |
endocardium | 2.79e-07 | 3 |
endocardial cushion | 2.79e-07 | 3 |
presumptive endocardium | 2.79e-07 | 3 |