FFCP PHASE1:Hg19::chr1:78621016..78621042,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:78621016..78621042,+ | |||
|coexpression_cluster_id=C86 | |coexpression_cluster_id=C86 | ||
|description=CAGE_peak_at_chr1:78621016..78621042,+ | |description=CAGE_peak_at_chr1:78621016..78621042,+ | ||
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|ontology_enrichment_celltype=CL:0002319!2.41e-09!25;CL:0002253!3.43e-09!2;CL:0002252!4.02e-09!2;CL:0000133!8.34e-09!59;CL:0000243!1.05e-08!15;CL:0000125!1.05e-08!15;CL:0000030!1.05e-08!15;CL:0000339!1.05e-08!15;CL:0000095!7.63e-08!17;CL:0000123!7.63e-08!17;CL:0000221!2.61e-07!71 | |ontology_enrichment_celltype=CL:0002319!2.41e-09!25;CL:0002253!3.43e-09!2;CL:0002252!4.02e-09!2;CL:0000133!8.34e-09!59;CL:0000243!1.05e-08!15;CL:0000125!1.05e-08!15;CL:0000030!1.05e-08!15;CL:0000339!1.05e-08!15;CL:0000095!7.63e-08!17;CL:0000123!7.63e-08!17;CL:0000221!2.61e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.55e-98;2!CL:0002563;3.10e-50;4!CL:0002251;2.29e-11;20 | |ontology_enrichment_celltype_v019=CL:0002253;1.55e-98;2!CL:0002563;3.10e-50;4!CL:0002251;2.29e-11;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002253,1.55e-98,2;CL:0002563,3.10e-50,4;CL:0002251,2.29e-11,20 | |||
|ontology_enrichment_development_v019=UBERON:0003104;4.53e-08;31 | |ontology_enrichment_development_v019=UBERON:0003104;4.53e-08;31 | ||
|ontology_enrichment_disease=DOID:3093!9.00e-21!11;DOID:3193!3.71e-09!2;DOID:962!3.71e-09!2 | |ontology_enrichment_disease=DOID:3093!9.00e-21!11;DOID:3193!3.71e-09!2;DOID:962!3.71e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | |ontology_enrichment_disease_v019=DOID:3119;1.43e-15;14!DOID:299;2.15e-09;25 | ||
|ontology_enrichment_disease_v019_2=DOID:3119,1.43e-15,14;DOID:299,2.15e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0002370!4.18e-16!4;UBERON:0005058!4.18e-16!4;UBERON:0009113!4.18e-16!4;UBERON:0003295!4.18e-16!4;UBERON:0005562!4.18e-16!4;UBERON:0003351!4.60e-11!6;UBERON:0004177!1.29e-09!7;UBERON:0003714!3.71e-09!2;UBERON:0000974!5.43e-07!10;UBERON:0003408!5.43e-07!10;UBERON:0001042!5.43e-07!10;UBERON:0009145!5.43e-07!10 | |ontology_enrichment_uberon=UBERON:0002370!4.18e-16!4;UBERON:0005058!4.18e-16!4;UBERON:0009113!4.18e-16!4;UBERON:0003295!4.18e-16!4;UBERON:0005562!4.18e-16!4;UBERON:0003351!4.60e-11!6;UBERON:0004177!1.29e-09!7;UBERON:0003714!3.71e-09!2;UBERON:0000974!5.43e-07!10;UBERON:0003408!5.43e-07!10;UBERON:0001042!5.43e-07!10;UBERON:0009145!5.43e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;3.10e-50;4!UBERON:0001242;3.10e-50;4!UBERON:0001262;3.10e-50;4!UBERON:0004786;3.10e-50;4!UBERON:0004808;3.10e-50;4!UBERON:0001277;3.10e-50;4!UBERON:0004907;1.48e-40;5!UBERON:0000485;1.78e-29;7!UBERON:0003929;1.78e-29;7!UBERON:0003350;5.22e-26;8!UBERON:0001155;2.62e-23;9!UBERON:0000059;2.25e-19;11!UBERON:0000160;1.85e-12;17!UBERON:0000344;2.29e-11;20!UBERON:0005409;4.42e-10;22!UBERON:0000490;4.53e-08;33!UBERON:0004921;2.32e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0001052;3.10e-50;4!UBERON:0001242;3.10e-50;4!UBERON:0001262;3.10e-50;4!UBERON:0004786;3.10e-50;4!UBERON:0004808;3.10e-50;4!UBERON:0001277;3.10e-50;4!UBERON:0004907;1.48e-40;5!UBERON:0000485;1.78e-29;7!UBERON:0003929;1.78e-29;7!UBERON:0003350;5.22e-26;8!UBERON:0001155;2.62e-23;9!UBERON:0000059;2.25e-19;11!UBERON:0000160;1.85e-12;17!UBERON:0000344;2.29e-11;20!UBERON:0005409;4.42e-10;22!UBERON:0000490;4.53e-08;33!UBERON:0004921;2.32e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.10e-50,4;UBERON:0001242,3.10e-50,4;UBERON:0001262,3.10e-50,4;UBERON:0004786,3.10e-50,4;UBERON:0004808,3.10e-50,4;UBERON:0001277,3.10e-50,4;UBERON:0004907,1.48e-40,5;UBERON:0003350,5.22e-26,8;UBERON:0001155,2.62e-23,9;UBERON:0000485,2.62e-23,9;UBERON:0000059,2.25e-19,11;UBERON:0000160,1.85e-12,17;UBERON:0001046,6.95e-12,19;UBERON:0000344,2.29e-11,20;UBERON:0005409,4.34e-09,25 | |||
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|short_description=p@chr1:78621016..78621042,+ | |short_description=p@chr1:78621016..78621042,+ | ||
}} | }} |
Latest revision as of 10:31, 28 July 2015
Short description: | p@chr1:78621016..78621042, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:78621016..78621042, + |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 1.55e-98 | 2 |
intestinal epithelial cell | 3.10e-50 | 4 |
epithelial cell of alimentary canal | 2.29e-11 | 20 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.10e-50 | 4 |
intestinal mucosa | 3.10e-50 | 4 |
wall of intestine | 3.10e-50 | 4 |
gastrointestinal system mucosa | 3.10e-50 | 4 |
gastrointestinal system epithelium | 3.10e-50 | 4 |
intestinal epithelium | 3.10e-50 | 4 |
lower digestive tract | 1.48e-40 | 5 |
epithelium of mucosa | 5.22e-26 | 8 |
colon | 2.62e-23 | 9 |
simple columnar epithelium | 2.62e-23 | 9 |
large intestine | 2.25e-19 | 11 |
intestine | 1.85e-12 | 17 |
hindgut | 6.95e-12 | 19 |
mucosa | 2.29e-11 | 20 |
gastrointestinal system | 4.34e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.43e-15 | 14 |
adenocarcinoma | 2.15e-09 | 25 |