FFCP PHASE1:Hg19::chr20:17953210..17953230,+: Difference between revisions
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|id=chr20:17953210..17953230,+
|short_description=p@chr20:17953210..17953230,+
|description=CAGE_peak_at_chr20:17953210..17953230,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:17953210..17953230,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_at_chr20:17953210..17953230,+ | |||
|id=chr20:17953210..17953230,+ | |||
|ontology_enrichment_celltype=CL:0000945!5.73e-20!24;CL:0000826!5.73e-20!24;CL:0000838!6.76e-11!52;CL:0000542!1.15e-10!53;CL:0000051!1.15e-10!53;CL:0000236!2.99e-09!14;CL:0000819!6.72e-09!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.21e-21;5!UBERON:0004872;1.91e-15;7 | |||
|ontology_enrichment_disease=DOID:0060073!6.72e-09!1;DOID:8675!6.72e-09!1;DOID:0060058!1.28e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.02e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.02e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002046!3.25e-07!5;UBERON:0004117!3.25e-07!5;UBERON:0007689!3.25e-07!5;UBERON:0007123!3.25e-07!5;UBERON:0003091!3.25e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;5.96e-34;3!UBERON:0002046;4.21e-21;5!UBERON:0004177;5.15e-21;5!UBERON:0005057;5.15e-21;5!UBERON:0002075;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,5.96e-34,3;UBERON:0004854,5.96e-34,3;UBERON:0009034,5.96e-34,3;UBERON:0002095,5.96e-34,3;UBERON:0004782,5.96e-34,3;UBERON:0003281,5.96e-34,3;UBERON:0009664,5.96e-34,3;UBERON:0002296,5.96e-34,3;UBERON:0005602,5.96e-34,3;UBERON:0001179,5.96e-34,3;UBERON:0006293,5.96e-34,3;UBERON:0002046,4.21e-21,5;UBERON:0004117,4.21e-21,5;UBERON:0007689,4.21e-21,5;UBERON:0007123,4.21e-21,5;UBERON:0003091,4.21e-21,5;UBERON:0004177,1.91e-15,7;UBERON:0005057,1.91e-15,7;UBERON:0000945,1.07e-13,8;UBERON:0010039,1.07e-13,8;UBERON:0009722,2.16e-10,11;UBERON:0007690,2.16e-10,11;UBERON:0004457,1.33e-09,12;UBERON:0000042,1.33e-09,12;UBERON:0003887,1.33e-09,12;UBERON:0008814,7.18e-07,18;UBERON:0002075,7.60e-07,18 | |||
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|short_description=p@chr20:17953210..17953230,+ | |||
}} | }} |
Latest revision as of 12:07, 28 July 2015
Short description: | p@chr20:17953210..17953230, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:17953210..17953230, + |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 5.96e-34 | 3 |
gastrointestinal system mesentery | 5.96e-34 | 3 |
stomach region | 5.96e-34 | 3 |
mesentery | 5.96e-34 | 3 |
gastrointestinal system serosa | 5.96e-34 | 3 |
mesentery of stomach | 5.96e-34 | 3 |
gut mesentery | 5.96e-34 | 3 |
dorsal mesentery | 5.96e-34 | 3 |
dorsal mesogastrium | 5.96e-34 | 3 |
peritoneal cavity | 5.96e-34 | 3 |
spleen primordium | 5.96e-34 | 3 |
thyroid gland | 4.21e-21 | 5 |
pharyngeal pouch | 4.21e-21 | 5 |
thyroid diverticulum | 4.21e-21 | 5 |
pharyngeal pouch 2 | 4.21e-21 | 5 |
thyroid primordium | 4.21e-21 | 5 |
hemopoietic organ | 1.91e-15 | 7 |
immune organ | 1.91e-15 | 7 |
stomach | 1.07e-13 | 8 |
food storage organ | 1.07e-13 | 8 |
entire pharyngeal arch endoderm | 2.16e-10 | 11 |
early pharyngeal endoderm | 2.16e-10 | 11 |
cavity lining | 1.33e-09 | 12 |
serous membrane | 1.33e-09 | 12 |
intraembryonic coelom | 1.33e-09 | 12 |
pharyngeal arch system | 7.18e-07 | 18 |
viscus | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.02e-11 | 10 |