FFCP PHASE1:Hg19::chr20:22197755..22197768,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:22197755..22197768,+ | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr20:22197755..22197768,+ | |description=CAGE_peak_at_chr20:22197755..22197768,+ | ||
|id=chr20:22197755..22197768,+ | |id=chr20:22197755..22197768,+ | ||
|ontology_enrichment_celltype=CL:0000945!3.52e-13!24;CL:0000826!3.52e-13!24;CL:0000946!2.04e-08!1;CL:0000786!2.04e-08!1;CL:0000980!2.04e-08!1;CL:0002336!8.69e-08!1;CL:0002261!8.69e-08!1;CL:0002170!8.69e-08!1 | |ontology_enrichment_celltype=CL:0000945!3.52e-13!24;CL:0000826!3.52e-13!24;CL:0000946!2.04e-08!1;CL:0000786!2.04e-08!1;CL:0000980!2.04e-08!1;CL:0002336!8.69e-08!1;CL:0002261!8.69e-08!1;CL:0002170!8.69e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000946;2.73e-29;1!CL:0000786;2.73e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.78e-29,1;CL:0000786,1.78e-29,1;CL:0000980,1.78e-29,1;CL:0000785,1.78e-15,2;CL:0000955,1.78e-15,2;CL:0000818,1.78e-15,2;CL:0000954,1.78e-15,2;CL:0000816,1.78e-15,2;CL:0000817,8.99e-11,3 | |||
|ontology_enrichment_development_v019=CL:0000954;2.21e-15;2!UBERON:0008814;2.21e-15;2!UBERON:0010056;2.21e-15;2 | |||
|ontology_enrichment_disease=DOID:2355!1.77e-08!1;DOID:630!2.90e-08!1;DOID:0050177!2.90e-08!1;DOID:0050427!2.90e-08!1;DOID:0050619!7.59e-08!1;DOID:1357!7.59e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:2355;9.99e-30;1!DOID:74;1.33e-15;2!DOID:4556;8.17e-11;3!DOID:1287;1.82e-08;4!DOID:3908;5.38e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.99e-30,1;DOID:74,1.33e-15,2;DOID:4556,8.17e-11,3;DOID:1287,1.82e-08,4;DOID:3908,5.38e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000341!3.09e-14!2;UBERON:0001723!2.65e-10!3;UBERON:0001033!2.65e-10!3;UBERON:0010056!2.65e-10!3;UBERON:0002372!2.35e-08!1;UBERON:0001961!2.35e-08!1;UBERON:0001744!2.35e-08!1;UBERON:0001735!2.35e-08!1;UBERON:0007029!3.34e-08!1;UBERON:0001764!7.59e-08!1;UBERON:0001825!7.59e-08!1;UBERON:0002022!1.21e-07!1;UBERON:0001042!8.07e-07!10;UBERON:0009145!8.07e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.19e-38;3!UBERON:0001033;3.19e-38;3!UBERON:0002372;2.73e-29;1!UBERON:0001961;2.73e-29;1!UBERON:0001744;2.73e-29;1!UBERON:0001042;2.73e-29;1!UBERON:0001735;2.73e-29;1!UBERON:0006562;2.21e-15;2!UBERON:0000165;9.22e-10;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.86e-38,3;UBERON:0001033,3.86e-38,3;UBERON:0010056,3.86e-38,3;UBERON:0002372,3.16e-29,1;UBERON:0001961,3.16e-29,1;UBERON:0001744,3.16e-29,1;UBERON:0001735,3.16e-29,1;UBERON:0001042,7.14e-26,10;UBERON:0009145,7.14e-26,10;UBERON:0006562,1.33e-23,11;UBERON:0001557,5.18e-14,19;UBERON:0000166,3.33e-12,22;UBERON:0000072,4.37e-10,47;UBERON:0000165,1.98e-09,29;UBERON:0000930,1.98e-09,29;UBERON:0000065,7.74e-09,54;UBERON:0000161,1.01e-07,36;UBERON:0008814,3.24e-07,18 | |||
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|short_description=p@chr20:22197755..22197768,+ | |short_description=p@chr20:22197755..22197768,+ | ||
}} | }} |
Latest revision as of 12:26, 28 July 2015
Short description: | p@chr20:22197755..22197768, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:22197755..22197768, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.78e-29 | 1 |
plasma cell | 1.78e-29 | 1 |
plasmablast | 1.78e-29 | 1 |
mature B cell | 1.78e-15 | 2 |
pre-B-II cell | 1.78e-15 | 2 |
transitional stage B cell | 1.78e-15 | 2 |
small pre-B-II cell | 1.78e-15 | 2 |
immature B cell | 1.78e-15 | 2 |
precursor B cell | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
tongue | 3.86e-38 | 3 |
gustatory system | 3.86e-38 | 3 |
future tongue | 3.86e-38 | 3 |
tonsil | 3.16e-29 | 1 |
mucosa-associated lymphoid tissue | 3.16e-29 | 1 |
lymphoid tissue | 3.16e-29 | 1 |
tonsillar ring | 3.16e-29 | 1 |
chordate pharynx | 7.14e-26 | 10 |
pharyngeal region of foregut | 7.14e-26 | 10 |
pharynx | 1.33e-23 | 11 |
upper respiratory tract | 5.18e-14 | 19 |
oral opening | 3.33e-12 | 22 |
segment of respiratory tract | 4.37e-10 | 47 |
mouth | 1.98e-09 | 29 |
stomodeum | 1.98e-09 | 29 |
respiratory tract | 7.74e-09 | 54 |
orifice | 1.01e-07 | 36 |
pharyngeal arch system | 3.24e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.99e-30 | 1 |
hematopoietic system disease | 1.33e-15 | 2 |
lung large cell carcinoma | 8.17e-11 | 3 |
cardiovascular system disease | 1.82e-08 | 4 |
non-small cell lung carcinoma | 5.38e-07 | 5 |