FFCP PHASE1:Hg19::chr20:23117745..23117783,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:23117745..23117783,+ | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_at_chr20:23117745..23117783,+ | |description=CAGE_peak_at_chr20:23117745..23117783,+ | ||
|id=chr20:23117745..23117783,+ | |id=chr20:23117745..23117783,+ | ||
|ontology_enrichment_celltype=CL:0002368!2.26e-08!13;CL:0001014!4.48e-08!2;CL:0001016!4.48e-08!2;CL:0002076!5.94e-08!43;CL:0000575!3.04e-07!2 | |ontology_enrichment_celltype=CL:0002368!2.26e-08!13;CL:0001014!4.48e-08!2;CL:0001016!4.48e-08!2;CL:0002076!5.94e-08!43;CL:0000575!3.04e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0001014;4.99e-45;2!CL:0001016;4.99e-45;2!CL:0000453;1.03e-18;5!CL:0000840;9.04e-16;5!CL:0000990;7.58e-11;8!CL:0002202;9.69e-11;9!CL:0002632;9.69e-11;9!CL:0000451;4.80e-09;10!CL:0002328;1.21e-08;3!CL:0000307;1.21e-08;3!CL:0002368;1.02e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,6.26e-45,2;CL:0001016,6.26e-45,2;CL:0000453,1.13e-18,5;CL:0000840,9.74e-16,5;CL:0001029,9.74e-16,5;CL:0002202,7.96e-11,9;CL:0000990,7.96e-11,8;CL:0002632,7.96e-11,9;CL:0000451,5.00e-09,10;CL:0002328,9.66e-09,3;CL:0000068,1.12e-08,3;CL:0000069,1.12e-08,3;CL:0000307,1.12e-08,3;CL:0000377,1.12e-08,3;CL:0002368,8.89e-08,13 | |||
|ontology_enrichment_development_v019=CL:0000377;1.21e-08;3 | |||
|ontology_enrichment_disease=DOID:1749!5.15e-08!14 | |ontology_enrichment_disease=DOID:1749!5.15e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.28e-23;1!DOID:3149;3.28e-23;1!DOID:3451;2.59e-12;2!DOID:4159;2.59e-12;2!DOID:0060122;2.59e-12;2!DOID:1749;2.77e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,6.40e-23,1;DOID:3149,6.40e-23,1;DOID:3451,3.62e-12,2;DOID:4159,3.62e-12,2;DOID:0060122,3.62e-12,2;DOID:1749,2.60e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001723!8.05e-10!3;UBERON:0001033!8.05e-10!3;UBERON:0010056!8.05e-10!3;UBERON:0006562!3.79e-09!11;UBERON:0001042!3.56e-07!10;UBERON:0009145!3.56e-07!10;UBERON:0004119!5.42e-07!169;UBERON:0000925!5.42e-07!169;UBERON:0006595!5.42e-07!169;UBERON:0001255!5.65e-07!2;UBERON:0001556!5.65e-07!2 | |ontology_enrichment_uberon=UBERON:0001723!8.05e-10!3;UBERON:0001033!8.05e-10!3;UBERON:0010056!8.05e-10!3;UBERON:0006562!3.79e-09!11;UBERON:0001042!3.56e-07!10;UBERON:0009145!3.56e-07!10;UBERON:0004119!5.42e-07!169;UBERON:0000925!5.42e-07!169;UBERON:0006595!5.42e-07!169;UBERON:0001255!5.65e-07!2;UBERON:0001556!5.65e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.28e-23;1!UBERON:0005056;3.28e-23;1!UBERON:0004176;3.28e-23;1!UBERON:0004815;1.21e-08;3!UBERON:0002031;1.21e-08;3!UBERON:0003343;6.87e-07;4!UBERON:0004785;6.87e-07;4!UBERON:0007196;8.33e-07;15!UBERON:0001558;8.33e-07;15!UBERON:0000014;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,2.10e-23,1;UBERON:0005056,2.10e-23,1;UBERON:0004815,9.66e-09,3;UBERON:0002031,9.66e-09,3;UBERON:0003343,6.87e-07,4;UBERON:0004785,6.87e-07,4;UBERON:0007196,7.41e-07,15;UBERON:0001558,7.41e-07,15 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0.30120591877825,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0.619412741790207,0.575384784644301,0.512321413058201,0.47296445977717,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.402115889646523,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34060455107157,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22587722705226,0,0,0,0.614321404198464,0,0,0,0.494411622680279,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0.392125068635479,0.335643173951685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37189356380129,0.69647365264322,0,0,0,0,0.0821154570532092,0.290967049465258,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,18.5712469093908,0,1.0063040627978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0.491545817507439,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53909170043221,0,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0.217716747896961,0.684466602170562,0,0,0,0.407016343054873,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:23117745..23117783,+ | |short_description=p@chr20:23117745..23117783,+ | ||
}} | }} |
Latest revision as of 12:30, 28 July 2015
Short description: | p@chr20:23117745..23117783, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:23117745..23117783, + |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 6.26e-45 | 2 |
immature CD1a-positive Langerhans cell | 6.26e-45 | 2 |
Langerhans cell | 1.13e-18 | 5 |
immature conventional dendritic cell | 9.74e-16 | 5 |
common dendritic progenitor | 9.74e-16 | 5 |
epithelial cell of tracheobronchial tree | 7.96e-11 | 9 |
conventional dendritic cell | 7.96e-11 | 8 |
epithelial cell of lower respiratory tract | 7.96e-11 | 9 |
dendritic cell | 5.00e-09 | 10 |
bronchial epithelial cell | 9.66e-09 | 3 |
duct epithelial cell | 1.12e-08 | 3 |
branched duct epithelial cell | 1.12e-08 | 3 |
tracheal epithelial cell | 1.12e-08 | 3 |
tracheoblast | 1.12e-08 | 3 |
respiratory epithelial cell | 8.89e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 2.10e-23 | 1 |
external female genitalia | 2.10e-23 | 1 |
lower respiratory tract epithelium | 9.66e-09 | 3 |
epithelium of bronchus | 9.66e-09 | 3 |
mucosa of oral region | 6.87e-07 | 4 |
respiratory system mucosa | 6.87e-07 | 4 |
tracheobronchial tree | 7.41e-07 | 15 |
lower respiratory tract | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 6.40e-23 | 1 |
keratoacanthoma | 6.40e-23 | 1 |
skin carcinoma | 3.62e-12 | 2 |
skin cancer | 3.62e-12 | 2 |
integumentary system cancer | 3.62e-12 | 2 |
squamous cell carcinoma | 2.60e-07 | 14 |