FFCP PHASE1:Hg19::chr20:33851227..33851246,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:33851227..33851246,+ | |||
|description=CAGE_peak_at_chr20:33851227..33851246,+ | |description=CAGE_peak_at_chr20:33851227..33851246,+ | ||
|id=chr20:33851227..33851246,+ | |id=chr20:33851227..33851246,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.12e-20!254;CL:0000077!2.09e-09!19;CL:1000497!1.19e-08!18;CL:0002518!1.19e-08!18;CL:0000039!1.39e-08!7;CL:0000586!1.39e-08!7;CL:1000449!4.53e-08!16;CL:0002322!1.13e-07!5;CL:1000507!2.59e-07!12;CL:1000494!2.59e-07!12 | |ontology_enrichment_celltype=CL:0000066!1.12e-20!254;CL:0000077!2.09e-09!19;CL:1000497!1.19e-08!18;CL:0002518!1.19e-08!18;CL:0000039!1.39e-08!7;CL:0000586!1.39e-08!7;CL:1000449!4.53e-08!16;CL:0002322!1.13e-07!5;CL:1000507!2.59e-07!12;CL:1000494!2.59e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.00e-13;7!CL:0000586;8.00e-13;7!CL:0000540;1.24e-08;6!CL:0000404;1.24e-08;6!CL:0000313;8.90e-07;1 | |ontology_enrichment_celltype_v019=CL:0000039;8.00e-13;7!CL:0000586;8.00e-13;7!CL:0000540;1.24e-08;6!CL:0000404;1.24e-08;6!CL:0000313;8.90e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.11e-13,253;CL:0000039,8.39e-13,7;CL:0000586,8.39e-13,7;CL:0000540,1.45e-08,6;CL:0000031,1.45e-08,6;CL:0000404,1.45e-08,6;CL:0000313,8.21e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.38e-13;10!UBERON:0005564;1.38e-13;10!UBERON:0008947;1.30e-12;29!CL:0000031;1.24e-08;6 | |ontology_enrichment_development_v019=UBERON:0009117;1.38e-13;10!UBERON:0005564;1.38e-13;10!UBERON:0008947;1.30e-12;29!CL:0000031;1.24e-08;6 | ||
|ontology_enrichment_disease=DOID:305!2.65e-22!106;DOID:0050687!9.87e-18!143;DOID:14566!2.42e-12!239;DOID:162!1.18e-11!235;DOID:299!6.52e-07!25 | |ontology_enrichment_disease=DOID:305!2.65e-22!106;DOID:0050687!9.87e-18!143;DOID:14566!2.42e-12!239;DOID:162!1.18e-11!235;DOID:299!6.52e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:2152;8.90e-07;1 | |ontology_enrichment_disease_v019=DOID:2152;8.90e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:305,6.25e-19,106;DOID:0050687,9.06e-13,143;DOID:14566,7.16e-10,239;DOID:162,2.98e-09,235;DOID:2152,8.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.69e-14!9;UBERON:0002113!2.75e-11!27;UBERON:0003918!2.75e-11!27;UBERON:0005095!2.75e-11!27;UBERON:0007687!2.75e-11!27;UBERON:0006554!3.17e-10!44;UBERON:0000058!4.33e-10!26;UBERON:0000489!5.73e-10!32;UBERON:0001008!7.25e-10!45;UBERON:0005172!1.48e-09!55;UBERON:0005173!1.48e-09!55;UBERON:0006555!5.13e-09!17;UBERON:0005103!5.13e-09!17;UBERON:0000083!5.13e-09!17;UBERON:0009201!5.13e-09!17;UBERON:0004819!5.13e-09!17;UBERON:0006553!5.13e-09!17;UBERON:0003074!5.13e-09!17;UBERON:0003060!5.13e-09!17;UBERON:0000080!2.32e-08!18;UBERON:0002120!2.32e-08!18;UBERON:0004875!2.32e-08!18;UBERON:0005721!2.32e-08!18;UBERON:0005754!2.32e-08!18;UBERON:0007297!2.32e-08!18;UBERON:0004211!4.53e-08!16;UBERON:0001285!4.53e-08!16;UBERON:0007684!4.53e-08!16;UBERON:0003220!4.53e-08!16;UBERON:0004208!4.53e-08!16;UBERON:0001048!4.73e-08!168;UBERON:0002417!5.54e-08!61;UBERON:0000916!5.54e-08!61;UBERON:0003064!6.62e-08!37;UBERON:0003886!1.58e-07!63;UBERON:0000466!2.03e-07!126;UBERON:0009773!2.59e-07!12;UBERON:0001231!2.59e-07!12;UBERON:0004810!2.59e-07!12;UBERON:0004876!2.97e-07!20;UBERON:0008947!5.21e-07!38;UBERON:0003258!5.21e-07!38;UBERON:0002553!6.83e-07!70;UBERON:0003887!8.78e-07!21 | |ontology_enrichment_uberon=UBERON:0001737!2.69e-14!9;UBERON:0002113!2.75e-11!27;UBERON:0003918!2.75e-11!27;UBERON:0005095!2.75e-11!27;UBERON:0007687!2.75e-11!27;UBERON:0006554!3.17e-10!44;UBERON:0000058!4.33e-10!26;UBERON:0000489!5.73e-10!32;UBERON:0001008!7.25e-10!45;UBERON:0005172!1.48e-09!55;UBERON:0005173!1.48e-09!55;UBERON:0006555!5.13e-09!17;UBERON:0005103!5.13e-09!17;UBERON:0000083!5.13e-09!17;UBERON:0009201!5.13e-09!17;UBERON:0004819!5.13e-09!17;UBERON:0006553!5.13e-09!17;UBERON:0003074!5.13e-09!17;UBERON:0003060!5.13e-09!17;UBERON:0000080!2.32e-08!18;UBERON:0002120!2.32e-08!18;UBERON:0004875!2.32e-08!18;UBERON:0005721!2.32e-08!18;UBERON:0005754!2.32e-08!18;UBERON:0007297!2.32e-08!18;UBERON:0004211!4.53e-08!16;UBERON:0001285!4.53e-08!16;UBERON:0007684!4.53e-08!16;UBERON:0003220!4.53e-08!16;UBERON:0004208!4.53e-08!16;UBERON:0001048!4.73e-08!168;UBERON:0002417!5.54e-08!61;UBERON:0000916!5.54e-08!61;UBERON:0003064!6.62e-08!37;UBERON:0003886!1.58e-07!63;UBERON:0000466!2.03e-07!126;UBERON:0009773!2.59e-07!12;UBERON:0001231!2.59e-07!12;UBERON:0004810!2.59e-07!12;UBERON:0004876!2.97e-07!20;UBERON:0008947!5.21e-07!38;UBERON:0003258!5.21e-07!38;UBERON:0002553!6.83e-07!70;UBERON:0003887!8.78e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.11e-19;9!UBERON:0001557;1.11e-19;9!UBERON:0000473;3.14e-11;8!UBERON:0003101;2.27e-08;22!UBERON:0000079;2.27e-08;22!UBERON:0003135;3.53e-08;11!UBERON:0000072;8.81e-08;37!UBERON:0000065;1.16e-07;44!UBERON:0004911;8.90e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001737;1.11e-19;9!UBERON:0001557;1.11e-19;9!UBERON:0000473;3.14e-11;8!UBERON:0003101;2.27e-08;22!UBERON:0000079;2.27e-08;22!UBERON:0003135;3.53e-08;11!UBERON:0000072;8.81e-08;37!UBERON:0000065;1.16e-07;44!UBERON:0004911;8.90e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.26e-20,9;UBERON:0000473,3.27e-11,8;UBERON:0008947,2.59e-09,38;UBERON:0003258,2.59e-09,38;UBERON:0001557,4.28e-09,19;UBERON:0003101,2.29e-08,22;UBERON:0000079,2.29e-08,22;UBERON:0003135,3.64e-08,11;UBERON:0000072,3.00e-07,47;UBERON:0004911,8.21e-07,1 | |||
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|short_description=p@chr20:33851227..33851246,+ | |short_description=p@chr20:33851227..33851246,+ | ||
}} | }} |
Latest revision as of 13:22, 28 July 2015
Short description: | p@chr20:33851227..33851246, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33851227..33851246, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.11e-13 | 253 |
germ line cell | 8.39e-13 | 7 |
germ cell | 8.39e-13 | 7 |
neuron | 1.45e-08 | 6 |
neuroblast | 1.45e-08 | 6 |
electrically signaling cell | 1.45e-08 | 6 |
serous secreting cell | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.26e-20 | 9 |
testis | 3.27e-11 | 8 |
respiratory primordium | 2.59e-09 | 38 |
endoderm of foregut | 2.59e-09 | 38 |
upper respiratory tract | 4.28e-09 | 19 |
male organism | 2.29e-08 | 22 |
male reproductive system | 2.29e-08 | 22 |
male reproductive organ | 3.64e-08 | 11 |
segment of respiratory tract | 3.00e-07 | 47 |
epithelium of female gonad | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.25e-19 | 106 |
cell type cancer | 9.06e-13 | 143 |
disease of cellular proliferation | 7.16e-10 | 239 |
cancer | 2.98e-09 | 235 |
ovary epithelial cancer | 8.21e-07 | 1 |