FFCP PHASE1:Hg19::chr20:35983148..35983193,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr20:35983148..35983193,+
|short_description=p@chr20:35983148..35983193,+
|description=CAGE_peak_at_chr20:35983148..35983193,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:35983148..35983193,+ | |||
|coexpression_cluster_id=C346 | |||
|description=CAGE_peak_at_chr20:35983148..35983193,+ | |||
|id=chr20:35983148..35983193,+ | |||
|ontology_enrichment_celltype=CL:0000784!1.28e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,1.51e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.07e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;1.75e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.85e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001871!6.27e-25!7;UBERON:0000200!6.30e-23!6;UBERON:0001950!6.24e-20!20;UBERON:0001869!4.25e-18!32;UBERON:0002619!4.54e-18!22;UBERON:0002771!3.53e-17!3;UBERON:0001893!6.03e-17!34;UBERON:0007023!8.93e-17!115;UBERON:0000956!8.19e-16!25;UBERON:0000203!8.19e-16!25;UBERON:0002791!1.94e-14!33;UBERON:0002020!5.64e-14!34;UBERON:0003528!5.64e-14!34;UBERON:0002780!8.86e-14!41;UBERON:0001890!8.86e-14!41;UBERON:0006240!8.86e-14!41;UBERON:0003080!2.07e-13!42;UBERON:0001049!2.04e-09!57;UBERON:0005068!2.04e-09!57;UBERON:0006241!2.04e-09!57;UBERON:0007135!2.04e-09!57;UBERON:0002616!4.89e-09!59;UBERON:0000955!8.65e-09!69;UBERON:0006238!8.65e-09!69;UBERON:0003056!1.11e-08!61;UBERON:0001017!1.94e-08!82;UBERON:0000073!3.23e-08!94;UBERON:0001016!3.23e-08!94;UBERON:0003075!4.06e-08!86;UBERON:0007284!4.06e-08!86;UBERON:0005743!6.08e-08!86;UBERON:0002346!1.19e-07!90;UBERON:0002146!4.25e-07!1;UBERON:0005623!4.25e-07!1;UBERON:0005705!4.51e-07!1;UBERON:0008193!4.51e-07!1;UBERON:0002514!4.51e-07!1;UBERON:0003462!4.51e-07!1;UBERON:0008001!4.51e-07!1;UBERON:0007914!4.51e-07!1;UBERON:0003457!4.51e-07!1;UBERON:0009292!4.51e-07!1;UBERON:0007375!4.51e-07!1;UBERON:0003323!4.51e-07!1;UBERON:0002397!4.51e-07!1;UBERON:0001709!4.51e-07!1;UBERON:0004066!4.51e-07!1;UBERON:0002244!4.51e-07!1;UBERON:0005620!4.51e-07!1;UBERON:0004068!4.51e-07!1;UBERON:0004362!4.51e-07!1;UBERON:0002581!4.78e-07!1;UBERON:0001154!5.06e-07!1;UBERON:0001153!5.06e-07!1;UBERON:0007190!9.51e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;9.90e-19;4!UBERON:0000160;1.01e-11;17!UBERON:0005409;2.59e-09;22!UBERON:0002110;8.31e-09;3!UBERON:0002114;1.04e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,9.47e-19,4;UBERON:0000160,9.24e-12,17;UBERON:0002110,8.31e-09,3;UBERON:0006242,8.31e-09,3;UBERON:0002114,1.04e-08,2;UBERON:0005409,2.46e-08,25 | |||
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|short_description=p@chr20:35983148..35983193,+ | |||
}} | }} |
Latest revision as of 13:44, 28 July 2015
Short description: | p@chr20:35983148..35983193, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:35983148..35983193, + |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
small intestine | 9.47e-19 | 4 |
intestine | 9.24e-12 | 17 |
gallbladder | 8.31e-09 | 3 |
gall bladder primordium | 8.31e-09 | 3 |
duodenum | 1.04e-08 | 2 |
gastrointestinal system | 2.46e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.85e-12 | 2 |