FFCP PHASE1:Hg19::chr20:38900598..38900615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:38900598..38900615,+ | |||
|coexpression_cluster_id=C49 | |coexpression_cluster_id=C49 | ||
|description=CAGE_peak_at_chr20:38900598..38900615,+ | |description=CAGE_peak_at_chr20:38900598..38900615,+ | ||
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|ontology_enrichment_celltype=CL:0002322!2.56e-76!5;CL:0000039!1.49e-34!7;CL:0000586!1.49e-34!7;CL:0000540!9.14e-24!6;CL:0000031!9.14e-24!6;CL:0000404!9.14e-24!6;CL:0000047!5.26e-18!8;CL:0000148!1.61e-14!10;CL:0000541!1.61e-14!10;CL:0000147!1.52e-10!14;CL:0000133!7.01e-09!59;CL:0000710!1.52e-07!20;CL:0000221!2.26e-07!71 | |ontology_enrichment_celltype=CL:0002322!2.56e-76!5;CL:0000039!1.49e-34!7;CL:0000586!1.49e-34!7;CL:0000540!9.14e-24!6;CL:0000031!9.14e-24!6;CL:0000404!9.14e-24!6;CL:0000047!5.26e-18!8;CL:0000148!1.61e-14!10;CL:0000541!1.61e-14!10;CL:0000147!1.52e-10!14;CL:0000133!7.01e-09!59;CL:0000710!1.52e-07!20;CL:0000221!2.26e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002322;6.27e-90;5!CL:0002321;1.59e-30;15!CL:0000148;5.30e-26;10!CL:0000540;5.89e-20;6!CL:0000404;5.89e-20;6!CL:0000147;8.02e-19;14!CL:0000710;2.05e-13;20!CL:0000075;3.99e-10;27!CL:0002077;7.81e-08;34 | |ontology_enrichment_celltype_v019=CL:0002322;6.27e-90;5!CL:0002321;1.59e-30;15!CL:0000148;5.30e-26;10!CL:0000540;5.89e-20;6!CL:0000404;5.89e-20;6!CL:0000147;8.02e-19;14!CL:0000710;2.05e-13;20!CL:0000075;3.99e-10;27!CL:0002077;7.81e-08;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.03e-90,5;CL:0000148,5.53e-26,10;CL:0000541,5.53e-26,10;CL:0000540,5.89e-20,6;CL:0000031,5.89e-20,6;CL:0000404,5.89e-20,6;CL:0000147,8.27e-19,14;CL:0000047,3.06e-15,8;CL:0000710,2.10e-13,20;CL:0000133,6.07e-12,59;CL:0000075,4.06e-10,27;CL:0000221,6.69e-10,72;CL:0002077,3.58e-08,34 | |||
|ontology_enrichment_development_v019=CL:0000031;5.89e-20;6!CL:0000133;6.95e-08;59 | |ontology_enrichment_development_v019=CL:0000031;5.89e-20;6!CL:0000133;6.95e-08;59 | ||
|ontology_enrichment_disease=DOID:3095!2.90e-11!22;DOID:2994!2.90e-11!22 | |ontology_enrichment_disease=DOID:3095!2.90e-11!22;DOID:2994!2.90e-11!22 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!2.67e-30!8;UBERON:0003135!3.65e-22!11;UBERON:0000991!8.73e-12!21;UBERON:0009196!8.73e-12!21;UBERON:0009117!8.73e-12!21;UBERON:0005564!8.73e-12!21;UBERON:0004176!2.90e-11!22;UBERON:0003101!2.90e-11!22;UBERON:0000079!2.90e-11!22 | |ontology_enrichment_uberon=UBERON:0000473!2.67e-30!8;UBERON:0003135!3.65e-22!11;UBERON:0000991!8.73e-12!21;UBERON:0009196!8.73e-12!21;UBERON:0009117!8.73e-12!21;UBERON:0005564!8.73e-12!21;UBERON:0004176!2.90e-11!22;UBERON:0003101!2.90e-11!22;UBERON:0000079!2.90e-11!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.92e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000922;3.92e-07;49 | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr20:38900598..38900615,+ | |short_description=p@chr20:38900598..38900615,+ | ||
}} | }} |
Latest revision as of 13:59, 28 July 2015
Short description: | p@chr20:38900598..38900615, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:38900598..38900615, + |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.03e-90 | 5 |
melanocyte | 5.53e-26 | 10 |
melanoblast | 5.53e-26 | 10 |
neuron | 5.89e-20 | 6 |
neuroblast | 5.89e-20 | 6 |
electrically signaling cell | 5.89e-20 | 6 |
pigment cell | 8.27e-19 | 14 |
neuronal stem cell | 3.06e-15 | 8 |
neurecto-epithelial cell | 2.10e-13 | 20 |
neurectodermal cell | 6.07e-12 | 59 |
columnar/cuboidal epithelial cell | 4.06e-10 | 27 |
ectodermal cell | 6.69e-10 | 72 |
ecto-epithelial cell | 3.58e-08 | 34 |