FFCP PHASE1:Hg19::chr20:47679880..47679883,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:47679880..47679883,+ | |||
|description=CAGE_peak_at_chr20:47679880..47679883,+ | |description=CAGE_peak_at_chr20:47679880..47679883,+ | ||
|id=chr20:47679880..47679883,+ | |id=chr20:47679880..47679883,+ | ||
|ontology_enrichment_celltype=CL:0000071;2.13e-11;18!CL:0002543;2.25e-09;6!CL:0002544;3.14e-09;6!CL:0002139;1.33e-08;24!CL:0000771;1.59e-07;2!CL:0002602;1.59e-07;2 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000071;2.13e-11;18!CL:0002543;2.25e-09;6!CL:0002544;3.14e-09;6!CL:0002139;1.33e-08;24!CL:0000771;1.59e-07;2!CL:0002602;1.59e-07;2 | ||
|ontology_enrichment_disease=DOID:3347;9.12e-14;1!DOID:4468;1.59e-07;2 | |ontology_enrichment_celltype_v019_2=CL:0000071,2.25e-11,18;CL:0002546,2.25e-11,18;CL:0002543,1.75e-09,6;CL:0002544,4.37e-09,6;CL:0002139,1.38e-08,24;CL:0002602,1.28e-07,2;CL:0000771,1.36e-07,2 | ||
|ontology_enrichment_uberon=UBERON:0007195;9.12e-14;1!UBERON:0004638;2.13e-11;18!UBERON:0001986;2.13e-11;18!UBERON:0004852;2.13e-11;18!UBERON:0000487;2.29e-09;22!UBERON:0006914;2.88e-08;25!UBERON:0006444;1.59e-07;2!UBERON:0001995;1.59e-07;2!UBERON:0004715;1.59e-07;2 | |ontology_enrichment_development_v019=CL:0002546;2.13e-11;18 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;9.12e-14;1!DOID:4468;1.59e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.15e-14,1;DOID:4468,1.45e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;9.12e-14;1!UBERON:0004638;2.13e-11;18!UBERON:0001986;2.13e-11;18!UBERON:0004852;2.13e-11;18!UBERON:0000487;2.29e-09;22!UBERON:0006914;2.88e-08;25!UBERON:0006444;1.59e-07;2!UBERON:0001995;1.59e-07;2!UBERON:0004715;1.59e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.42e-13,1;UBERON:0004638,2.25e-11,18;UBERON:0001986,2.25e-11,18;UBERON:0004852,2.25e-11,18;UBERON:0000487,2.39e-09,22;UBERON:0006914,2.99e-08,25;UBERON:0006444,1.28e-07,2;UBERON:0001995,1.28e-07,2;UBERON:0004715,1.28e-07,2 | |||
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| ||
|short_description=p@chr20:47679880..47679883,+ | |short_description=p@chr20:47679880..47679883,+ | ||
}} | }} |
Latest revision as of 14:56, 28 July 2015
Short description: | p@chr20:47679880..47679883, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:47679880..47679883, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 2.25e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.25e-11 | 18 |
vein endothelial cell | 1.75e-09 | 6 |
aortic endothelial cell | 4.37e-09 | 6 |
endothelial cell of vascular tree | 1.38e-08 | 24 |
annulus pulposus cell | 1.28e-07 | 2 |
eosinophil | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.42e-13 | 1 |
blood vessel endothelium | 2.25e-11 | 18 |
endothelium | 2.25e-11 | 18 |
cardiovascular system endothelium | 2.25e-11 | 18 |
simple squamous epithelium | 2.39e-09 | 22 |
squamous epithelium | 2.99e-08 | 25 |
annulus fibrosus | 1.28e-07 | 2 |
fibrocartilage | 1.28e-07 | 2 |
annulus fibrosus disci intervertebralis | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.15e-14 | 1 |
clear cell adenocarcinoma | 1.45e-07 | 2 |