FFCP PHASE1:Hg19::chr20:48121824..48121844,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:48121824..48121844,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_at_chr20:48121824..48121844,- | |description=CAGE_peak_at_chr20:48121824..48121844,- | ||
|id=chr20:48121824..48121844,- | |id=chr20:48121824..48121844,- | ||
|ontology_enrichment_celltype=CL:0000057!2.58e-17!75;CL:0000055!1.38e-15!180;CL:0002334!4.44e-12!12;CL:1000306!5.83e-07!4;CL:0002547!5.83e-07!4 | |ontology_enrichment_celltype=CL:0000057!2.58e-17!75;CL:0000055!1.38e-15!180;CL:0002334!4.44e-12!12;CL:1000306!5.83e-07!4;CL:0002547!5.83e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000135;4.89e-21;3!CL:0000388;4.89e-21;3!CL:0000499;3.47e-11;28!CL:0000214;2.11e-10;3!CL:0000632;5.24e-10;3!CL:0002579;5.73e-10;3!CL:0000174;1.12e-09;3!CL:0002616;3.22e-08;1!CL:0002174;7.09e-08;1!CL:0002581;7.09e-08;1!CL:0002591;7.09e-08;1!CL:0000501;7.09e-08;1!CL:1000306;1.24e-07;4!CL:0002547;1.24e-07;4!CL:0000327;1.50e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,2.40e-21,3;CL:0000388,2.40e-21,3;CL:0000499,3.18e-11,28;CL:0000214,2.11e-10,3;CL:0002579,5.24e-10,3;CL:0000632,6.57e-10,3;CL:0000174,1.46e-09,3;CL:0000057,1.02e-08,76;CL:0002616,3.11e-08,1;CL:0002581,5.40e-08,1;CL:0002174,7.59e-08,1;CL:0000501,7.59e-08,1;CL:0002591,8.69e-08,1;CL:1000306,1.22e-07,4;CL:0002547,1.22e-07,4;CL:0000327,1.63e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;7.09e-08;1!DOID:3571;7.09e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,4.11e-08,1;DOID:3571,9.29e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000948!6.54e-10!24;UBERON:0005498!6.54e-10!24;UBERON:0004140!6.54e-10!24;UBERON:0009881!6.54e-10!24;UBERON:0004141!6.54e-10!24;UBERON:0003084!6.54e-10!24;UBERON:0007005!6.54e-10!24;UBERON:0004139!6.54e-10!24;UBERON:0004291!6.54e-10!24;UBERON:0007100!9.67e-10!27;UBERON:0004872!1.30e-07!84;UBERON:0003688!1.36e-07!6;UBERON:0002358!1.36e-07!6;UBERON:0003684!1.36e-07!6;UBERON:0001178!1.36e-07!6;UBERON:0001009!3.85e-07!113;UBERON:0000415!5.83e-07!4;UBERON:0007240!5.83e-07!4;UBERON:0005742!5.83e-07!4;UBERON:0005734!5.83e-07!4;UBERON:0004664!5.83e-07!4;UBERON:0004663!5.83e-07!4;UBERON:0004535!5.94e-07!110;UBERON:0004457!9.35e-07!12;UBERON:0000042!9.35e-07!12 | |ontology_enrichment_uberon=UBERON:0000948!6.54e-10!24;UBERON:0005498!6.54e-10!24;UBERON:0004140!6.54e-10!24;UBERON:0009881!6.54e-10!24;UBERON:0004141!6.54e-10!24;UBERON:0003084!6.54e-10!24;UBERON:0007005!6.54e-10!24;UBERON:0004139!6.54e-10!24;UBERON:0004291!6.54e-10!24;UBERON:0007100!9.67e-10!27;UBERON:0004872!1.30e-07!84;UBERON:0003688!1.36e-07!6;UBERON:0002358!1.36e-07!6;UBERON:0003684!1.36e-07!6;UBERON:0001178!1.36e-07!6;UBERON:0001009!3.85e-07!113;UBERON:0000415!5.83e-07!4;UBERON:0007240!5.83e-07!4;UBERON:0005742!5.83e-07!4;UBERON:0005734!5.83e-07!4;UBERON:0004664!5.83e-07!4;UBERON:0004663!5.83e-07!4;UBERON:0004535!5.94e-07!110;UBERON:0004457!9.35e-07!12;UBERON:0000042!9.35e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.89e-21;3!UBERON:0000043;4.89e-21;3!UBERON:0007845;4.89e-21;3!UBERON:0004457;7.72e-19;9!UBERON:0000042;7.72e-19;9!UBERON:0005406;2.13e-14;2!UBERON:0003688;1.34e-10;6!UBERON:0002358;1.34e-10;6!UBERON:0003684;1.34e-10;6!UBERON:0001178;1.34e-10;6!UBERON:0006915;2.11e-10;3!UBERON:0007616;2.11e-10;3!UBERON:0002217;2.11e-10;3!UBERON:0002018;2.11e-10;3!UBERON:0004797;1.24e-07;4!UBERON:0000415;1.24e-07;4!UBERON:0007240;1.24e-07;4!UBERON:0005742;1.24e-07;4!UBERON:0005734;1.24e-07;4!UBERON:0004664;1.24e-07;4!UBERON:0004663;1.24e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,2.40e-21,3;UBERON:0000043,2.40e-21,3;UBERON:0007845,2.40e-21,3;UBERON:0005406,1.57e-14,2;UBERON:0004457,3.50e-14,12;UBERON:0000042,3.50e-14,12;UBERON:0003688,1.03e-10,6;UBERON:0002358,1.03e-10,6;UBERON:0003684,1.03e-10,6;UBERON:0001178,1.03e-10,6;UBERON:0006915,2.11e-10,3;UBERON:0007616,2.11e-10,3;UBERON:0002217,2.11e-10,3;UBERON:0002018,2.11e-10,3;UBERON:0000415,1.22e-07,4;UBERON:0007240,1.22e-07,4;UBERON:0005742,1.22e-07,4;UBERON:0005734,1.22e-07,4;UBERON:0004664,1.22e-07,4;UBERON:0004663,1.22e-07,4 | |||
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|short_description=p@chr20:48121824..48121844,- | |short_description=p@chr20:48121824..48121844,- | ||
}} | }} |
Latest revision as of 15:01, 28 July 2015
Short description: | p@chr20:48121824..48121844, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:48121824..48121844, - |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 2.40e-21 | 3 |
tendon cell | 2.40e-21 | 3 |
stromal cell | 3.18e-11 | 28 |
synovial cell | 2.11e-10 | 3 |
omentum preadipocyte | 5.24e-10 | 3 |
hepatic stellate cell | 6.57e-10 | 3 |
steroid hormone secreting cell | 1.46e-09 | 3 |
fibroblast | 1.02e-08 | 76 |
perirenal adipocyte cell | 3.11e-08 | 1 |
perirenal preadipocyte | 5.40e-08 | 1 |
follicular cell of ovary | 7.59e-08 | 1 |
granulosa cell | 7.59e-08 | 1 |
smooth muscle cell of the pulmonary artery | 8.69e-08 | 1 |
fibroblast of tunica adventitia of artery | 1.22e-07 | 4 |
fibroblast of the aortic adventitia | 1.22e-07 | 4 |
extracellular matrix secreting cell | 1.63e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 2.40e-21 | 3 |
tendon | 2.40e-21 | 3 |
regular connective tissue | 2.40e-21 | 3 |
perirenal fat | 1.57e-14 | 2 |
cavity lining | 3.50e-14 | 12 |
serous membrane | 3.50e-14 | 12 |
omentum | 1.03e-10 | 6 |
peritoneum | 1.03e-10 | 6 |
abdominal cavity | 1.03e-10 | 6 |
visceral peritoneum | 1.03e-10 | 6 |
stratified squamous epithelium | 2.11e-10 | 3 |
layer of synovial tissue | 2.11e-10 | 3 |
synovial joint | 2.11e-10 | 3 |
synovial membrane of synovial joint | 2.11e-10 | 3 |
artery wall | 1.22e-07 | 4 |
tunica adventitia of artery | 1.22e-07 | 4 |
adventitia | 1.22e-07 | 4 |
tunica adventitia of blood vessel | 1.22e-07 | 4 |
aorta tunica adventitia | 1.22e-07 | 4 |
aorta wall | 1.22e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 4.11e-08 | 1 |
liver cancer | 9.29e-08 | 1 |