FFCP PHASE1:Hg19::chr20:49983362..49983378,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr20:49983362..49983378,+ to FFCP PHASE1:Hg19::chr20:49983362..49983378,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:49983362..49983378,+ | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr20:49983362..49983378,+ | |||
|id=chr20:49983362..49983378,+ | |||
|ontology_enrichment_celltype=CL:0002594!7.23e-09!4;CL:0000359!1.29e-08!32;CL:0000548!3.78e-07!679;CL:0000004!3.78e-07!679;CL:0000255!3.78e-07!679;CL:0000012!5.31e-07!682;CL:0000064!5.96e-07!3;CL:0005012!5.96e-07!3;CL:0000067!5.96e-07!3;CL:0002304!5.96e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.00e-12;3!CL:0000067;2.00e-12;3!CL:0005012;2.00e-12;3!CL:0002304;2.00e-12;3!CL:0002379;1.80e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.38e-12,3;CL:0000067,2.38e-12,3;CL:0005012,2.38e-12,3;CL:0002304,2.38e-12,3;CL:0002379,1.80e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.32e-12!14;DOID:120!4.00e-09!27;DOID:193!2.86e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:3620;1.80e-10;1!DOID:3565;1.80e-10;1!DOID:2394;4.86e-10;14!DOID:0060085;6.05e-10;1!DOID:3165;6.05e-10;1!DOID:0060121;6.05e-10;1!DOID:2438;6.05e-10;1!DOID:4418;6.05e-10;1!DOID:3347;6.05e-10;1!DOID:3571;6.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.80e-10,1;DOID:3565,1.80e-10,1;DOID:0060085,4.06e-10,1;DOID:3165,4.06e-10,1;DOID:0060121,4.06e-10,1;DOID:2438,4.06e-10,1;DOID:4418,4.06e-10,1;DOID:2394,6.18e-10,14;DOID:3347,6.33e-10,1;DOID:3571,1.07e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002118!2.22e-10!5;UBERON:0004532!2.22e-10!5;UBERON:0001310!7.23e-09!4;UBERON:0000992!8.28e-09!13;UBERON:0000488!3.72e-08!4;UBERON:0004872!3.04e-07!84;UBERON:0003914!3.05e-07!118;UBERON:0001778!5.96e-07!3;UBERON:0001775!5.96e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;4.70e-16;5!UBERON:0001778;2.00e-12;3!UBERON:0001775;2.00e-12;3!UBERON:0000992;8.49e-11;13!UBERON:0000488;1.52e-09;4!UBERON:0007625;1.09e-07;11!UBERON:0000991;9.67e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,8.09e-16,5;UBERON:0001778,2.38e-12,3;UBERON:0001775,2.38e-12,3;UBERON:0000992,1.10e-10,13;UBERON:0000488,1.73e-09,4;UBERON:0007625,1.14e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,2.01697543935533,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.661743720148475,1.55210578223795,1.14185221401064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0,0,2.1349799145941,0.74000264525148,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,1.34385702559088,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,0.7333828582095,0.258543431515556,0,0.845302752556,0,0,0,0,0.532844358032199,0,0,0,1.62868092146868,0,0,1.20575750823834,0.871533458600294,0.399891964728228,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0.732555718546747,0.330037999682352,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0.37064843820784,0.286249773483982,0,0,0,0,0,0,1.56989728039846,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.811641507850816,0.92947049429925,0.845086807596724,0.143411352204052,0,2.85336841185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,0.222617410045812,0,0,0,0,0,17.6924820728728,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0.0821154570532092,0,0,0,2.32971271899477,1.58971689362392,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9405822136616,0,0,0.298509605773748,0.233713309847224,0,0.378806010550178,0,0,0.228840068396924,0,0.15543720058278,0.73927574994817,0.796483835818512,0.449803112163605,1.39736661188633,0,0,0.521745061811734,0.751288044986092,0,0.813741466409323,1.45478927362048,1.07410557042488,0.464033759878494,1.19428766609585,1.20008329398946,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0.911579868532147,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0.115525666150338,0,1.3807198521202,0,0,0.80682027481408,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,2.01697543935533,0.602694528023977,0.730310090387373,0.487932798790507,0.492484232307152,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.661743720148475,1.55210578223795,1.14185221401064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0.573673241497627,0,0,2.1349799145941,0.74000264525148,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,1.34385702559088,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560655421726804,0,0.7333828582095,0.258543431515556,0,0.845302752556,0,0,0,0,0.532844358032199,0,0,0,1.62868092146868,0,0,1.20575750823834,0.871533458600294,0.399891964728228,0,0,0,0.479249710983165,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0,0.732555718546747,0.330037999682352,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0.37064843820784,0.286249773483982,0,0,0,0,0,0,1.56989728039846,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0.811641507850816,0.92947049429925,0.845086807596724,0.143411352204052,0,2.85336841185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,0.222617410045812,0,0,0,0,0,17.6924820728728,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0,0,0,0.0821154570532092,0,0,0,2.32971271899477,1.58971689362392,0,0,0.320635281006135,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9405822136616,0,0,0.298509605773748,0.233713309847224,0,0.378806010550178,0,0,0.228840068396924,0,0.15543720058278,0.73927574994817,0.796483835818512,0.449803112163605,1.39736661188633,0,0,0.521745061811734,0.751288044986092,0,0.813741466409323,1.45478927362048,1.07410557042488,0.464033759878494,1.19428766609585,1.20008329398946,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0.911579868532147,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0.115525666150338,0,1.3807198521202,0,0,0.80682027481408,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:49983362..49983378,+ | |||
}} | }} |
Latest revision as of 15:19, 28 July 2015
Short description: | p@chr20:49983362..49983378, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:49983362..49983378, + |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.38e-12 | 3 |
ciliated epithelial cell | 2.38e-12 | 3 |
multi-ciliated epithelial cell | 2.38e-12 | 3 |
non-pigmented ciliary epithelial cell | 2.38e-12 | 3 |
meningothelial cell | 1.80e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
right ovary | 8.09e-16 | 5 |
ciliary epithelium | 2.38e-12 | 3 |
ciliary body | 2.38e-12 | 3 |
female gonad | 1.10e-10 | 13 |
atypical epithelium | 1.73e-09 | 4 |
pigment epithelium of eye | 1.14e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.80e-10 | 1 |
meningioma | 1.80e-10 | 1 |
organ system benign neoplasm | 4.06e-10 | 1 |
skin benign neoplasm | 4.06e-10 | 1 |
integumentary system benign neoplasm | 4.06e-10 | 1 |
dermis tumor | 4.06e-10 | 1 |
cutaneous fibrous histiocytoma | 4.06e-10 | 1 |
ovarian cancer | 6.18e-10 | 14 |
osteosarcoma | 6.33e-10 | 1 |
liver cancer | 1.07e-09 | 1 |