FFCP PHASE1:Hg19::chr20:51740243..51740246,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:51740243..51740246,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_at_chr20:51740243..51740246,+ | |description=CAGE_peak_at_chr20:51740243..51740246,+ | ||
|id=chr20:51740243..51740246,+ | |id=chr20:51740243..51740246,+ | ||
|ontology_enrichment_celltype=CL:0002166!4.43e-20!3;CL:0002537!1.42e-12!5;CL:0001014!1.39e-08!2;CL:0001016!1.39e-08!2;CL:1000415!2.15e-08!2 | |ontology_enrichment_celltype=CL:0002166!4.43e-20!3;CL:0002537!1.42e-12!5;CL:0001014!1.39e-08!2;CL:0001016!1.39e-08!2;CL:1000415!2.15e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0001014;7.14e-26;2!CL:0001016;7.14e-26;2!CL:0002166;1.12e-17;3!CL:0002537;2.80e-11;5!CL:0000453;3.26e-11;5!CL:0000197;1.27e-09;6!CL:0000098;1.27e-09;6!CL:0002167;1.27e-09;6!CL:0000840;1.44e-09;5!CL:0000990;8.37e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.14e-26,2;CL:0001016,7.14e-26,2;CL:0002166,1.12e-17,3;CL:0002537,2.66e-11,5;CL:0000453,3.26e-11,5;CL:0000197,1.32e-09,6;CL:0000098,1.32e-09,6;CL:0002167,1.32e-09,6;CL:0000840,1.44e-09,5;CL:0001029,1.44e-09,5;CL:0002077,7.37e-07,34;CL:0000990,8.37e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001708!2.56e-15!4;UBERON:0001704!2.56e-15!4;UBERON:0002372!3.17e-15!1;UBERON:0001961!3.17e-15!1;UBERON:0001744!3.17e-15!1;UBERON:0001735!3.17e-15!1;UBERON:0002090!1.57e-10!6;UBERON:0005631!7.26e-10!14;UBERON:0000158!7.26e-10!14;UBERON:0000305!3.04e-09!7;UBERON:0004871!3.38e-08!8 | |ontology_enrichment_uberon=UBERON:0001708!2.56e-15!4;UBERON:0001704!2.56e-15!4;UBERON:0002372!3.17e-15!1;UBERON:0001961!3.17e-15!1;UBERON:0001744!3.17e-15!1;UBERON:0001735!3.17e-15!1;UBERON:0002090!1.57e-10!6;UBERON:0005631!7.26e-10!14;UBERON:0000158!7.26e-10!14;UBERON:0000305!3.04e-09!7;UBERON:0004871!3.38e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.29e-13;4!UBERON:0008895;1.29e-13;4!UBERON:0011159;3.60e-11;5!UBERON:0000305;1.96e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,1.29e-13,4;UBERON:0008895,1.29e-13,4;UBERON:0011159,3.60e-11,5;UBERON:0010188,1.57e-09,6;UBERON:0002539,1.57e-09,6;UBERON:0008816,1.57e-09,6;UBERON:0000305,1.89e-08,7;UBERON:0004871,1.49e-07,8 | |||
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|short_description=p@chr20:51740243..51740246,+ | |short_description=p@chr20:51740243..51740246,+ | ||
}} | }} |
Latest revision as of 15:28, 28 July 2015
Short description: | p@chr20:51740243..51740246, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:51740243..51740246, + |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.14e-26 | 2 |
immature CD1a-positive Langerhans cell | 7.14e-26 | 2 |
epithelial cell of Malassez | 1.12e-17 | 3 |
amnion mesenchymal stem cell | 2.66e-11 | 5 |
Langerhans cell | 3.26e-11 | 5 |
receptor cell | 1.32e-09 | 6 |
sensory epithelial cell | 1.32e-09 | 6 |
olfactory epithelial cell | 1.32e-09 | 6 |
immature conventional dendritic cell | 1.44e-09 | 5 |
common dendritic progenitor | 1.44e-09 | 5 |
ecto-epithelial cell | 7.37e-07 | 34 |
conventional dendritic cell | 8.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 1.29e-13 | 4 |
splanchnocranium | 1.29e-13 | 4 |
primary subdivision of cranial skeletal system | 3.60e-11 | 5 |
protuberance | 1.57e-09 | 6 |
pharyngeal arch | 1.57e-09 | 6 |
embryonic head | 1.57e-09 | 6 |
amnion | 1.89e-08 | 7 |
somatic layer of lateral plate mesoderm | 1.49e-07 | 8 |