Personal tools

FFCP PHASE1:Hg19::chr20:56234717..56234758,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr20:56234717..56234758,-
|coexpression_cluster_id=C46
|coexpression_cluster_id=C46
|description=CAGE_peak_at_chr20:56234717..56234758,-
|description=CAGE_peak_at_chr20:56234717..56234758,-
|id=chr20:56234717..56234758,-
|id=chr20:56234717..56234758,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0000138;2.45e-12;6!CL:0000153;1.12e-08;9!CL:0000447;1.12e-08;9
|ontology_enrichment_celltype_v019_2=CL:0000058,2.45e-12,6;CL:0000138,2.45e-12,6;CL:0000153,1.12e-08,9;CL:0000447,1.12e-08,9
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:4929;7.05e-34;2
|ontology_enrichment_disease_v019_2=DOID:4929,7.05e-34,2
|ontology_enrichment_uberon=UBERON:0000369!2.50e-08!4;UBERON:0002435!2.50e-08!4;UBERON:0000204!2.50e-08!4;UBERON:0010082!2.50e-08!4;UBERON:0000365!2.23e-07!5;UBERON:0002308!2.76e-07!9;UBERON:0000125!2.76e-07!9;UBERON:0005383!4.31e-07!3;UBERON:0005382!4.31e-07!3;UBERON:0009663!6.59e-07!7
|ontology_enrichment_uberon=UBERON:0000369!2.50e-08!4;UBERON:0002435!2.50e-08!4;UBERON:0000204!2.50e-08!4;UBERON:0010082!2.50e-08!4;UBERON:0000365!2.23e-07!5;UBERON:0002308!2.76e-07!9;UBERON:0000125!2.76e-07!9;UBERON:0005383!4.31e-07!3;UBERON:0005382!4.31e-07!3;UBERON:0009663!6.59e-07!7
|ontology_enrichment_uberon_v019=UBERON:0004913;4.66e-66;1!UBERON:0003703;4.66e-66;1!UBERON:0001174;4.66e-66;1!UBERON:0004914;4.66e-66;1!UBERON:0002114;4.09e-23;2!UBERON:0002394;1.03e-17;4!UBERON:0003928;1.03e-17;4!UBERON:0002108;1.83e-14;4!UBERON:0002294;9.89e-11;7!UBERON:0001173;9.89e-11;7!UBERON:0000058;6.56e-08;10
|ontology_enrichment_uberon_v019_2=UBERON:0004913,4.66e-66,1;UBERON:0003703,4.66e-66,1;UBERON:0001174,4.66e-66,1;UBERON:0004914,4.66e-66,1;UBERON:0002114,4.09e-23,2;UBERON:0002108,1.83e-14,4;UBERON:0002394,2.74e-12,6;UBERON:0003928,2.74e-12,6;UBERON:0002294,1.21e-08,9;UBERON:0001173,1.21e-08,9;UBERON:0004912,1.21e-08,9
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43317435151318,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,7.043042491493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0.102268682502155,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.918736432059601,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0,0,0,1.18284868973636,0.135075169236789,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0.332660356546013,0.244209805832924,0,0,0.179650404213174,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43317435151318,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.601519410909855,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.86101074534246,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,7.043042491493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0.102268682502155,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.219385397153973,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0,0.137041924646751,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0,0,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.918736432059601,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0.20170506870352,0,0,0,1.18284868973636,0.135075169236789,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0.314231179832004,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0.332660356546013,0.244209805832924,0,0,0.179650404213174,0,0,0,0,0,0
|short_description=p@chr20:56234717..56234758,-
|short_description=p@chr20:56234717..56234758,-
}}
}}

Latest revision as of 15:43, 28 July 2015

Short description:p@chr20:56234717..56234758, -
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr20:56234717..56234758, -
Coexpression cluster:C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
1
2
3
4
5
6
7
8




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr20:56234717..56234758,-&oldid=3496689"